RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 HRO43593 1189 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CCNE1P24864 410 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TXKP42681 527 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 FNTBP49356 437 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 GLRA4Q5JXX5 417 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 YAF2Q8IY57 180 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 FAM200AQ8TCP9 573 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 OXER1Q8TDS5 423 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TM6SF1Q9BZW5 370 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CCDC113Q9H0I3 377 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 TUFT1Q9NNX1 390 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ASAH2Q9NR71 780 aa13.41□□□□□ -0.26
CDK5RAP3-216ENST00000579853 AKAP13Q12802 2813 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 COL4A2P08572 1712 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SMIM28A0A1B0GU29 152 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 GDF9O60383 454 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 NEMFO60524 1076 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 PMLP29590 882 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 KRT2P35908 639 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CCR2P41597 374 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 BRCC3P46736 316 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 EPHA5P54756 1037 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ATF7IP2Q5U623 682 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CENPQQ7L2Z9 268 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 SYNPOQ8N3V7 929 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 ZSCAN18Q8TBC5 510 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 IFT74Q96LB3 600 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CCDC94Q9BW85 323 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 CXCL16Q9H2A7 254 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 AFF4Q9UHB7 1163 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 NUB1Q9Y5A7 615 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 GREB1Q4ZG55 1949 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 WDFY3Q8IZQ1 3526 aa13.4□□□□□ -0.26
CDK5RAP3-216ENST00000579853 HEPACAM2A8MVW5 462 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 K7ESF4 209 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ARNTLO00327 626 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ZNF806P0C7X5 589 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 LIG1P18858 919 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CYP11B2P19099 503 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 KPNA1P52294 538 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ARPP19P56211 112 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 FCHO2Q0JRZ9 810 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MRPL58Q14197 206 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 GAS6Q14393 721 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CTXN3Q4LDR2 81 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 EARS2Q5JPH6 523 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 EEF1DP3Q658K8 133 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ZNF280DQ6N043 979 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 WDR5BQ86VZ2 330 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 RALGPS2Q86X27 583 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 FAM160A2Q8N612 972 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 APPL2Q8NEU8 664 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 GOLGA2P5Q9HBQ8 144 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 FBXL5Q9UKA1 691 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TNFSF13BQ9Y275 285 aa13.39□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CCDC163A0A0D9SF12 145 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MYBPHLA2RUH7 354 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 I3L4J1 428 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PODXLO00592 558 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SEC24AO95486 1093 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SPATA31C1P0DKV0 1188 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MYL4P12829 197 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MUTP22033 750 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 VIPR2P41587 438 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 GRM5P41594 1212 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 NR5A1Q13285 461 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PLD1Q13393 1074 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 XKR4Q5GH76 650 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 N4BP2L1Q5TBK1 243 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ALKAL1Q6UXT8 129 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 HAUS6Q7Z4H7 955 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CATSPER3Q86XQ3 398 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 KIFAP3Q92845 792 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ZSWIM3Q96MP5 696 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MTMR9Q96QG7 549 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 POLR3CQ9BUI4 534 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CEP72Q9P209 647 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 PHLPP2Q6ZVD8 1323 aa13.38□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SPECC1L-ADORA2AF8WAN1 911 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 K7ERI5 159 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 MOSPD3O75425 235 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 FGF19O95750 216 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 CPB1P15086 417 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 IGFBP6P24592 240 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 SCRN1Q12765 414 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 TWF1Q12792 350 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
CDK5RAP3-216ENST00000579853 HEATR6Q6AI08 1181 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms