RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 PCIF1Q9H4Z3 704 aa25.96■■□□□ 1.75
LIMD2-207ENST00000579329 DPP7Q9UHL4 492 aa25.96■■□□□ 1.75
LIMD2-207ENST00000579329 VWA8A3KMH1 1905 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 SYN3O14994 580 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 TKTP29401 623 aaKnown RBP25.95■■□□□ 1.74
LIMD2-207ENST00000579329 GUCY2FP51841 1108 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 SNRPFP62306 86 aaKnown RBP25.95■■□□□ 1.74
LIMD2-207ENST00000579329 ITIH3Q06033 890 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 PSMD2Q13200 908 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 CES5AQ6NT32 575 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 ANKS3Q6ZW76 656 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 GLYCTKQ8IVS8 523 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 NELFCDQ8IXH7 590 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 GPD1LQ8N335 351 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 SUSD6Q92537 303 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 CCDC47Q96A33 483 aaKnown RBP25.95■■□□□ 1.74
LIMD2-207ENST00000579329 SUSD3Q96L08 255 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 SFXN1Q9H9B4 322 aa25.95■■□□□ 1.74
LIMD2-207ENST00000579329 ANK1P16157 1881 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 GOLGA8IPA6NC78 632 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 GOLGA8JA6NMD2 632 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 RPN1P04843 607 aaKnown RBP25.94■■□□□ 1.74
LIMD2-207ENST00000579329 PRR29P0C7W0 189 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 RARS2Q5T160 578 aaKnown RBP25.94■■□□□ 1.74
LIMD2-207ENST00000579329 KANK3Q6NY19 840 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 HS2ST1Q7LGA3 356 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 NT5DC4Q86YG4 428 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 ADHFE1Q8IWW8 467 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 GJD3Q8N144 294 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 ZSWIM2Q8NEG5 633 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 NOC3LQ8WTT2 800 aaKnown RBP25.94■■□□□ 1.74
LIMD2-207ENST00000579329 POP1Q99575 1024 aaKnown RBP25.94■■□□□ 1.74
LIMD2-207ENST00000579329 CLSTN3Q9BQT9 956 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 ADAM7Q9H2U9 754 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 MAN1C1Q9NR34 630 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 RBAKQ9NYW8 714 aaPredicted RBP25.94■■□□□ 1.74
LIMD2-207ENST00000579329 MTRRQ9UBK8 725 aa25.94■■□□□ 1.74
LIMD2-207ENST00000579329 ZP2Q05996 745 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 PALB2Q86YC2 1186 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 TMEM130Q8N3G9 435 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 C12orf76Q8N812 135 aaPredicted RBP25.93■■□□□ 1.74
LIMD2-207ENST00000579329 HDAC7Q8WUI4 952 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 AGPAT3Q9NRZ7 376 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 HSPBP1Q9NZL4 362 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 CHMP5Q9NZZ3 219 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 BACE2Q9Y5Z0 518 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 PLXNA3P51805 1871 aa25.93■■□□□ 1.74
LIMD2-207ENST00000579329 TGFB1I1O43294 461 aa25.92■■□□□ 1.74
LIMD2-207ENST00000579329 TGM5O43548 720 aa25.92■■□□□ 1.74
LIMD2-207ENST00000579329 DPYDQ12882 1025 aa25.92■■□□□ 1.74
LIMD2-207ENST00000579329 STK4Q13043 487 aa25.92■■□□□ 1.74
LIMD2-207ENST00000579329 CBX2Q14781 532 aaPredicted RBP25.92■■□□□ 1.74
LIMD2-207ENST00000579329 EFCAB13Q8IY85 973 aa25.92■■□□□ 1.74
LIMD2-207ENST00000579329 FMR1NBQ8N0W7 255 aaPredicted RBP25.92■■□□□ 1.74
LIMD2-207ENST00000579329 KIAA0895Q8NCT3 520 aa25.92■■□□□ 1.74
LIMD2-207ENST00000579329 PLEKHA4Q9H4M7 779 aa25.92■■□□□ 1.74
LIMD2-207ENST00000579329 KIAA1586Q9HCI6 787 aa25.92■■□□□ 1.74
LIMD2-207ENST00000579329 CGNQ9P2M7 1197 aaKnown RBP25.92■■□□□ 1.74
LIMD2-207ENST00000579329 PAX3P23760 479 aa25.91■■□□□ 1.74
LIMD2-207ENST00000579329 SSTR3P32745 418 aaPredicted RBP25.91■■□□□ 1.74
LIMD2-207ENST00000579329 MTHFRP42898 656 aa25.91■■□□□ 1.74
LIMD2-207ENST00000579329 KNOP1Q1ED39 458 aaKnown RBP25.91■■□□□ 1.74
LIMD2-207ENST00000579329 VARS2Q5ST30 1063 aaKnown RBP25.91■■□□□ 1.74
LIMD2-207ENST00000579329 C9orf57Q5W0N0 161 aa25.91■■□□□ 1.74
LIMD2-207ENST00000579329 LILRA6Q6PI73 481 aa25.91■■□□□ 1.74
LIMD2-207ENST00000579329 APPL2Q8NEU8 664 aa25.91■■□□□ 1.74
LIMD2-207ENST00000579329 RIPOR3Q96MK2 946 aa25.91■■□□□ 1.74
LIMD2-207ENST00000579329 NECTIN4Q96NY8 510 aa25.91■■□□□ 1.74
LIMD2-207ENST00000579329 PHF7Q9BWX1 381 aaPredicted RBP25.91■■□□□ 1.74
LIMD2-207ENST00000579329 PCDHB8Q9UN66 801 aa25.91■■□□□ 1.74
LIMD2-207ENST00000579329 ZNF233A6NK53 670 aa25.9■■□□□ 1.74
LIMD2-207ENST00000579329 H7C4K7 107 aa25.9■■□□□ 1.74
LIMD2-207ENST00000579329 AARSP49588 968 aaKnown RBP eCLIP25.9■■□□□ 1.74
LIMD2-207ENST00000579329 FAM160A1Q05DH4 1040 aa25.9■■□□□ 1.74
LIMD2-207ENST00000579329 TMC5Q6UXY8 1006 aa25.9■■□□□ 1.74
LIMD2-207ENST00000579329 CMASQ8NFW8 434 aaPredicted RBP25.9■■□□□ 1.74
LIMD2-207ENST00000579329 DPP3Q9NY33 737 aa25.9■■□□□ 1.74
LIMD2-207ENST00000579329 ANO9A1A5B4 782 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 C19orf67A6NJJ6 358 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 M0QZQ0 153 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 TULP1O00294 542 aaPredicted RBP25.89■■□□□ 1.74
LIMD2-207ENST00000579329 PIRO00625 290 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 PPEF2O14830 753 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 CLIC2O15247 247 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 RHOBTB3O94955 611 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 SPATA31D3P0C874 917 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 OR1D2P34982 312 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 WNT7BP56706 349 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 RAB33AQ14088 237 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 SURF1Q15526 300 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 ATAT1Q5SQI0 421 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 DSTYKQ6XUX3 929 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 SPATA31D4Q6ZUB0 917 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 C12orf56Q8IXR9 622 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 KREMEN2Q8NCW0 462 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 GOLGA5Q8TBA6 731 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 CACTINQ8WUQ7 758 aaKnown RBP25.89■■□□□ 1.74
LIMD2-207ENST00000579329 FBXW11Q9UKB1 542 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 CDY1Q9Y6F8 540 aa25.89■■□□□ 1.74
LIMD2-207ENST00000579329 PRR33A8MZF0 331 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms