RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 FOXP1Q9H334 677 aaPredicted RBP9.37□□□□□ -0.91
CASC3-206ENST00000579238 TRPV4Q9HBA0 871 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 CNTN3Q9P232 1028 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 ARHGAP28Q9P2N2 729 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 AFF4Q9UHB7 1163 aaKnown RBP9.37□□□□□ -0.91
CASC3-206ENST00000579238 FBXL5Q9UKA1 691 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 RAB23Q9ULC3 237 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 NUB1Q9Y5A7 615 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 TRIP11Q15643 1979 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 WDR87Q6ZQQ6 2873 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
CASC3-206ENST00000579238 ZNF263O14978 683 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 MOSPD3O75425 235 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 MCF2P10911 925 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 PROZP22891 400 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 GDI1P31150 447 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.91
CASC3-206ENST00000579238 EPHA5P54756 1037 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 TWF1Q12792 350 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 DMP1Q13316 513 aaPredicted RBP9.36□□□□□ -0.91
CASC3-206ENST00000579238 TTC38Q5R3I4 469 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 LAIR1Q6GTX8 287 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 ZNF280DQ6N043 979 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 MPZL3Q6UWV2 235 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 TAS1R3Q7RTX0 852 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 APPL2Q8NEU8 664 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 MSANTD3Q96H12 275 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 ZNF512Q96ME7 567 aaPredicted RBP9.36□□□□□ -0.91
CASC3-206ENST00000579238 ZSWIM3Q96MP5 696 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 TCHPQ9BT92 498 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 TARS2Q9BW92 718 aaKnown RBP9.36□□□□□ -0.91
CASC3-206ENST00000579238 LMAN1LQ9HAT1 526 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 PARD6AQ9NPB6 346 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 KMT5AQ9NQR1 393 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 DDX19AQ9NUU7 478 aaKnown RBP9.36□□□□□ -0.91
CASC3-206ENST00000579238 CEP72Q9P209 647 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 LRWD1Q9UFC0 647 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 KIAA1024Q9UPX6 916 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 RBM19Q9Y4C8 960 aaKnown RBP9.36□□□□□ -0.91
CASC3-206ENST00000579238 STK24Q9Y6E0 443 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 PIAS3Q9Y6X2 628 aa9.36□□□□□ -0.91
CASC3-206ENST00000579238 ABLIM1O14639 778 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 LRP3O75074 770 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 HIP1RO75146 1068 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 RETP07949 1114 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 CHRNB1P11230 501 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 MYL4P12829 197 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 MARCKSP29966 332 aaPredicted RBP9.35□□□□□ -0.91
CASC3-206ENST00000579238 MCM4P33991 863 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 VIPR2P41587 438 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 CXCL12P48061 93 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 TRAPPC10P48553 1259 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 NEK4P51957 841 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 MLLT6P55198 1093 aaPredicted RBP9.35□□□□□ -0.91
CASC3-206ENST00000579238 CACNA1BQ00975 2339 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 ST3GAL1Q11201 340 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 PDIA5Q14554 519 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 C1orf228Q6PIY5 440 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 MFSD6LQ8IWD5 586 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 DAW1Q8N136 415 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 C4orf32Q8N8J7 132 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 BEST2Q8NFU1 509 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 ZSCAN18Q8TBC5 510 aaPredicted RBP9.35□□□□□ -0.91
CASC3-206ENST00000579238 SNX29Q8TEQ0 813 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 DDX12PQ92771 950 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 E2F7Q96AV8 911 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 C18orf25Q96B23 403 aaPredicted RBP9.35□□□□□ -0.91
CASC3-206ENST00000579238 C8orf76Q96K31 380 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 DRC1Q96MC2 740 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 TBC1D32Q96NH3 1257 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 RAB34Q9BZG1 259 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 GPR88Q9GZN0 384 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 C17orf75Q9HAS0 396 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 ASAH2Q9NR71 780 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 DNM3Q9UQ16 869 aa9.35□□□□□ -0.91
CASC3-206ENST00000579238 TPRP12270 2363 aaKnown RBP9.35□□□□□ -0.91
CASC3-206ENST00000579238 DCDC2BA2VCK2 349 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 HEPACAM2A8MVW5 462 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 ARNTLO00327 626 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 MEFVO15553 781 aaPredicted RBP9.34□□□□□ -0.91
CASC3-206ENST00000579238 HARSP12081 509 aaKnown RBP9.34□□□□□ -0.91
CASC3-206ENST00000579238 CPB1P15086 417 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 GJA1P17302 382 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 CCNE1P24864 410 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 SATB1Q01826 763 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 YWHAHQ04917 246 aaPredicted RBP9.34□□□□□ -0.91
CASC3-206ENST00000579238 SPEM2Q0P670 501 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 MAPK7Q13164 816 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 TEAD2Q15562 447 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 LPAL2Q16609 132 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 SLC10A6Q3KNW5 377 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 RNF19BQ6ZMZ0 732 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 PRR23BQ6ZRT6 265 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 YAF2Q8IY57 180 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 SPEM1Q8N4L4 309 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 IGSF22Q8N9C0 903 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 SHKBP1Q8TBC3 707 aa9.34□□□□□ -0.91
CASC3-206ENST00000579238 NETO1Q8TDF5 533 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms