RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 I3L4J1 428 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 PIRO00625 290 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 PPEF2O14830 753 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 MAPK13O15264 365 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 AKAP3O75969 853 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 TNNI1P19237 187 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 PSMC2P35998 433 aaKnown RBP16.63■□□□□ 0.25
IFT20-208ENST00000578985 GLUD2P49448 558 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 FKBP3Q00688 224 aaKnown RBP16.63■□□□□ 0.25
IFT20-208ENST00000578985 DSG1Q02413 1049 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 PTPN14Q15678 1187 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 CCDC183Q5T5S1 534 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 KIAA0319Q5VV43 1072 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.63■□□□□ 0.25
IFT20-208ENST00000578985 RBM23Q86U06 439 aaKnown RBP16.63■□□□□ 0.25
IFT20-208ENST00000578985 CEP57Q86XR8 500 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 FAM186BQ8IYM0 893 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 C1orf127Q8N9H9 656 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 MLKLQ8NB16 471 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 OR5B17Q8NGF7 314 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 PLEKHO2Q8TD55 490 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 TMC2Q8TDI7 906 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 RIN2Q8WYP3 895 aaPredicted RBP16.63■□□□□ 0.25
IFT20-208ENST00000578985 POP1Q99575 1024 aaKnown RBP16.63■□□□□ 0.25
IFT20-208ENST00000578985 TTPALQ9BTX7 342 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 GZF1Q9H116 711 aaPredicted RBP16.63■□□□□ 0.25
IFT20-208ENST00000578985 TLE6Q9H808 572 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 ITGA11Q9UKX5 1188 aa16.63■□□□□ 0.25
IFT20-208ENST00000578985 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 C2CD2LO14523 706 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 LILRB3O75022 631 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 PTMSP20962 102 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 FGFR3P22607 806 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 POLR2BP30876 1174 aaKnown RBP16.62■□□□□ 0.25
IFT20-208ENST00000578985 NRIP1P48552 1158 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 STX17P56962 302 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 NLRP12P59046 1061 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 HYAL1Q12794 435 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 PAK1Q13153 545 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 SKIV2LQ15477 1246 aaKnown RBP16.62■□□□□ 0.25
IFT20-208ENST00000578985 TTI2Q6NXR4 508 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 ZC3H3Q8IXZ2 948 aaKnown RBP16.62■□□□□ 0.25
IFT20-208ENST00000578985 GPR65Q8IYL9 337 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 CSGALNACT2Q8N6G5 542 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 PARD3BQ8TEW8 1205 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 EEF2KMTQ96G04 330 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 SUSD3Q96L08 255 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 IGFLR1Q9H665 355 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 AGAP1Q9UPQ3 857 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 IRAK3Q9Y616 596 aa16.62■□□□□ 0.25
IFT20-208ENST00000578985 CHD7Q9P2D1 2997 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 PER2O15055 1255 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 ITGB3P05106 788 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 KRT19P08727 400 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 EPB41P11171 864 aaKnown RBP16.61■□□□□ 0.25
IFT20-208ENST00000578985 KRT13P13646 458 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 PAX3P23760 479 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 AARSP49588 968 aaKnown RBP eCLIP16.61■□□□□ 0.25
IFT20-208ENST00000578985 TAF6P49848 677 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 LILRA4P59901 499 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 RBP5P82980 135 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 DUSP6Q16828 381 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 FOXR2Q6PJQ5 311 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 DSTYKQ6XUX3 929 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 RBM43Q6ZSC3 357 aaKnown RBP16.61■□□□□ 0.25
IFT20-208ENST00000578985 INTS8Q75QN2 995 aaKnown RBP16.61■□□□□ 0.25
IFT20-208ENST00000578985 ZNF516Q92618 1163 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 ZNF560Q96MR9 790 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 KLHL5Q96PQ7 755 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 CDCA3Q99618 268 aaPredicted RBP16.61■□□□□ 0.25
IFT20-208ENST00000578985 DUSP9Q99956 384 aaKnown RBP16.61■□□□□ 0.25
IFT20-208ENST00000578985 MKNK1Q9BUB5 465 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 EMILIN2Q9BXX0 1053 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 SIX4Q9UIU6 781 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 PCDHB8Q9UN66 801 aa16.61■□□□□ 0.25
IFT20-208ENST00000578985 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
IFT20-208ENST00000578985 SYN3O14994 580 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 SPTLC1O15269 473 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
IFT20-208ENST00000578985 NCK2O43639 380 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 CLASP2O75122 1294 aaKnown RBP16.6■□□□□ 0.25
IFT20-208ENST00000578985 CNPP09543 421 aaKnown RBP16.6■□□□□ 0.25
IFT20-208ENST00000578985 TKTP29401 623 aaKnown RBP16.6■□□□□ 0.25
IFT20-208ENST00000578985 GTF2F1P35269 517 aaKnown RBP eCLIP16.6■□□□□ 0.25
IFT20-208ENST00000578985 VAMP7P51809 220 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 AP3M2P53677 418 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 CLDN10P78369 228 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 PRSS55Q6UWB4 352 aaPredicted RBP16.6■□□□□ 0.25
IFT20-208ENST00000578985 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 USP37Q86T82 979 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 CXorf38Q8TB03 319 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 PIK3R5Q8WYR1 880 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 CEP63Q96MT8 703 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 RXFP1Q9HBX9 757 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.6■□□□□ 0.25
IFT20-208ENST00000578985 TMEM63CQ9P1W3 806 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
IFT20-208ENST00000578985 R3HCC1Q9Y3T6 440 aaKnown RBP16.6■□□□□ 0.25
IFT20-208ENST00000578985 BRWD1Q9NSI6 2320 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms