RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 UROC1Q96N76 676 aa13.09□□□□□ -0.31
IFT20-207ENST00000578547 SIX4Q9UIU6 781 aa13.09□□□□□ -0.31
IFT20-207ENST00000578547 GBF1Q92538 1859 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 LGALS16A8MUM7 142 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 NT5C1B-RDH14C9J2C7 533 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 F8W810 466 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 KIF4AO95239 1232 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 VNN1O95497 513 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 LAG3P18627 525 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 DNAJB2P25686 324 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 MYL6P60660 151 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 RBP5P82980 135 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 TAP1Q03518 808 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 FKBP15Q5T1M5 1219 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 C15orf39Q6ZRI6 1047 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 APTXQ7Z2E3 356 aaKnown RBP13.08□□□□□ -0.32
IFT20-207ENST00000578547 ZNF558Q96NG5 402 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 CRACR2AQ9BSW2 395 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 IFNKQ9P0W0 207 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 GCNT4Q9P109 453 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
IFT20-207ENST00000578547 KIAA1671Q9BY89 1806 aa13.08□□□□□ -0.32
IFT20-207ENST00000578547 NRP1O14786 923 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 B3GAT3O94766 335 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 CST3P01034 146 aaPredicted RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 IGFBP6P24592 240 aaPredicted RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 LRPAP1P30533 357 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 RPL9P32969 192 aaKnown RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 CTNNB1P35222 781 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 ALDH7A1P49419 539 aaKnown RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 UBASH3AP57075 661 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 MCCD1P59942 119 aaPredicted RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 UBXN1Q04323 297 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 CETN1Q12798 172 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 UPP1Q16831 310 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 ZNF699Q32M78 642 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 HABP4Q5JVS0 413 aaKnown RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 COLGALT1Q8NBJ5 622 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 C3orf58Q8NDZ4 430 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 FBXL13Q8NEE6 735 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 SEMA4DQ92854 862 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 CLP1Q92989 425 aaKnown RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 TIFAQ96CG3 184 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 DDX27Q96GQ7 796 aaKnown RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 ZNF560Q96MR9 790 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 TMEM175Q9BSA9 504 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 C17orf80Q9BSJ5 609 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 PI4K2AQ9BTU6 479 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 IMPG2Q9BZV3 1241 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 INTS2Q9H0H0 1204 aaKnown RBP13.07□□□□□ -0.32
IFT20-207ENST00000578547 MTUS1Q9ULD2 1270 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 FAN1Q9Y2M0 1017 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 NUB1Q9Y5A7 615 aa13.07□□□□□ -0.32
IFT20-207ENST00000578547 ANO9A1A5B4 782 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 PIRO00625 290 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 LRRN2O75325 713 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 ALDH2P05091 517 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 ITGB1P05556 798 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 GALTP07902 379 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 TAF6P49848 677 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 LRMPQ12912 555 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 MYO1EQ12965 1108 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 PTPN21Q16825 1174 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 SV2CQ496J9 727 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 EPC2Q52LR7 807 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 SPOPLQ6IQ16 392 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 KCNT2Q6UVM3 1135 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 GBP6Q6ZN66 633 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 LRRC52Q8N7C0 313 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 CCDC150Q8NCX0 1101 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 CXorf38Q8TB03 319 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 LRCH3Q96II8 777 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 HPDLQ96IR7 371 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
IFT20-207ENST00000578547 NAP1L5Q96NT1 182 aaPredicted RBP13.06□□□□□ -0.32
IFT20-207ENST00000578547 COLEC11Q9BWP8 271 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 SLC28A3Q9HAS3 691 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 RAB20Q9NX57 234 aa13.06□□□□□ -0.32
IFT20-207ENST00000578547 LAMA2P24043 3122 aaKnown RBP13.05□□□□□ -0.32
IFT20-207ENST00000578547 A0A1B0GTH6 734 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 LRRC10BA6NIK2 292 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 I3L4J1 428 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 SPTLC1O15269 473 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 P4HA2O15460 535 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 TEX33O43247 280 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 TADA2AO75478 443 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 BMPR1AP36894 532 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 PNPLA4P41247 253 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 BRCC3P46736 316 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 ERVK-21P61565 698 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 NOP14P78316 857 aaKnown RBP13.05□□□□□ -0.32
IFT20-207ENST00000578547 EXOC3L4Q17RC7 722 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 WDR44Q5JSH3 913 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 PPP2R2DQ66LE6 453 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 DCLRE1AQ6PJP8 1040 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 SCARA5Q6ZMJ2 495 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 TMEM173Q86WV6 379 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms