RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 USP6NLQ92738 828 aa11.89□□□□□ -0.51
SKA2-204ENST00000578519 PKNOX2Q96KN3 472 aa11.89□□□□□ -0.51
SKA2-204ENST00000578519 MIS12Q9H081 205 aa11.89□□□□□ -0.51
SKA2-204ENST00000578519 IFT122Q9HBG6 1241 aa11.89□□□□□ -0.51
SKA2-204ENST00000578519 CNOT8Q9UFF9 292 aaKnown RBP11.89□□□□□ -0.51
SKA2-204ENST00000578519 ITGA11Q9UKX5 1188 aa11.89□□□□□ -0.51
SKA2-204ENST00000578519 MTUS1Q9ULD2 1270 aa11.89□□□□□ -0.51
SKA2-204ENST00000578519 KIAA1257Q9ULG3 409 aa11.89□□□□□ -0.51
SKA2-204ENST00000578519 C2CD2Q9Y426 696 aa11.89□□□□□ -0.51
SKA2-204ENST00000578519 A0A1B0GUA9 196 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 M0QZ92 97 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 MYO1FO00160 1098 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 SPOPO43791 374 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 FAM189A1O60320 539 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 ZRANB2O95218 330 aaKnown RBP eCLIP11.88□□□□□ -0.51
SKA2-204ENST00000578519 F2P00734 622 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 MYL3P08590 195 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 KRT19P08727 400 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 PAEPP09466 180 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 ZNF865P0CJ78 1059 aaPredicted RBP11.88□□□□□ -0.51
SKA2-204ENST00000578519 SMIM10L2AP0DMW4 78 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 SMIM10L2BP0DMW5 78 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 ATF7P17544 494 aaPredicted RBP11.88□□□□□ -0.51
SKA2-204ENST00000578519 CYP2B6P20813 491 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 TNFSF9P41273 254 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 GRM5P41594 1212 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 SNX16P57768 344 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 MYO1EQ12965 1108 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 TMEM132DQ14C87 1099 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 NOTUMQ6P988 496 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 ILDR2Q71H61 639 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 KIAA0319LQ8IZA0 1049 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 MCOLN2Q8IZK6 566 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 GOLGA6L1Q8N7Z2 621 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 DDX1Q92499 740 aaKnown RBP11.88□□□□□ -0.51
SKA2-204ENST00000578519 PCDHB18PQ96TA0 734 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 PSMB7Q99436 277 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 NUP85Q9BW27 656 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 MTMR12Q9C0I1 747 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 PDZD7Q9H5P4 517 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 SLITRK6Q9H5Y7 841 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.88□□□□□ -0.517e-8■■■■■ 186.3
SKA2-204ENST00000578519 STIM2Q9P246 746 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 ABT1Q9ULW3 272 aaKnown RBP11.88□□□□□ -0.51
SKA2-204ENST00000578519 ALG6Q9Y672 507 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 SIP14410 1827 aa11.88□□□□□ -0.51
SKA2-204ENST00000578519 C17orf102A2RUQ5 167 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 LACTBL1A8MY62 500 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 PDE2AO00408 941 aaPredicted RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 KRIT1O00522 736 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 DUSP11O75319 330 aaKnown RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 STAU1O95793 577 aaKnown RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 VTNP04004 478 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 CYP1A1P04798 512 aaPredicted RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 UNGP13051 313 aaPredicted RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 ACO1P21399 889 aaKnown RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 CTNNA2P26232 953 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 TNFRSF8P28908 595 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 DNA2P51530 1060 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 MYL6P60660 151 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 LACTBP83111 547 aaPredicted RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 CENPCQ03188 943 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 PAK2Q13177 524 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 MESDQ14696 234 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 SEZ6Q53EL9 994 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 HSP90B2PQ58FF3 399 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 ZBTB41Q5SVQ8 909 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 TMEM63BQ5T3F8 832 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 SLC27A1Q6PCB7 646 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 CCNI2Q6ZMN8 369 aaPredicted RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 PHF13Q86YI8 300 aaPredicted RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 HACE1Q8IYU2 909 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 C7orf31Q8N865 590 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 SMC1BQ8NDV3 1235 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 ARHGEF26Q96DR7 871 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 TRIM6Q9C030 488 aaPredicted RBP11.87□□□□□ -0.51
SKA2-204ENST00000578519 VRTNQ9H8Y1 702 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 VIPAS39Q9H9C1 493 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 OSGEPQ9NPF4 335 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 SETD4Q9NVD3 440 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 PARVAQ9NVD7 372 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 TAS2R14Q9NYV8 317 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 ADAM22Q9P0K1 906 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 STRIP2Q9ULQ0 834 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 PLXNA1Q9UIW2 1896 aa11.87□□□□□ -0.51
SKA2-204ENST00000578519 MROH7Q68CQ1 1323 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 MBLAC1A4D2B0 266 aaPredicted RBP11.86□□□□□ -0.51
SKA2-204ENST00000578519 GPR25O00155 361 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 HAS3O00219 553 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 B4GALT5O43286 388 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 TSPAN1O60635 241 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 CST3P01034 146 aaPredicted RBP11.86□□□□□ -0.51
SKA2-204ENST00000578519 EDN1P05305 212 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 ARF4P18085 180 aaPredicted RBP11.86□□□□□ -0.51
SKA2-204ENST00000578519 EIF4BP23588 611 aaKnown RBP11.86□□□□□ -0.51
SKA2-204ENST00000578519 HOXD10P28358 340 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms