RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 CTXN1P60606 82 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 SP5Q6BEB4 398 aaPredicted RBP3.62□□□□□ -1.83
CDH8-204ENST00000577536 RHOT1Q8IXI2 618 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 DCBLD1Q8N8Z6 715 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 Q8NA96 180 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.62□□□□□ -1.83
CDH8-204ENST00000577536 NLGN4YQ8NFZ3 816 aaPredicted RBP3.62□□□□□ -1.83
CDH8-204ENST00000577536 ATL2Q8NHH9 583 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 SSH3Q8TE77 659 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 NRG4Q8WWG1 115 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 SSH1Q8WYL5 1049 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 INTUQ9ULD6 942 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 PHLDB1Q86UU1 1377 aa3.62□□□□□ -1.83
CDH8-204ENST00000577536 C1QL1O75973 258 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 HAUS5O94927 633 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 SLC6A4P31645 630 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 NHLH1Q02575 133 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 LRCH2Q5VUJ6 765 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
CDH8-204ENST00000577536 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.61□□□□□ -1.83
CDH8-204ENST00000577536 ARHGEF25Q86VW2 580 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 PPM1NQ8N819 430 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 HEPHQ9BQS7 1158 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 FAM126AQ9BYI3 521 aaPredicted RBP3.61□□□□□ -1.83
CDH8-204ENST00000577536 SLC17A6Q9P2U8 582 aa3.61□□□□□ -1.83
CDH8-204ENST00000577536 SAP30BPQ9UHR5 308 aaKnown RBP3.61□□□□□ -1.83
CDH8-204ENST00000577536 A0A1W2PS29 197 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 PEX1O43933 1283 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 MATN4O95460 622 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 FOLR3P41439 243 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 TARDBPQ13148 414 aaKnown RBP eCLIP3.6□□□□□ -1.83
CDH8-204ENST00000577536 SF3B3Q15393 1217 aaKnown RBP3.6□□□□□ -1.83
CDH8-204ENST00000577536 CLUL1Q15846 466 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 KIAA0895LQ68EN5 471 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 VWA1Q6PCB0 445 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 MIGA2Q7L4E1 593 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 CNTD1Q8N815 330 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 ZNF384Q8TF68 577 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 TLR10Q9BXR5 811 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 KLK15Q9H2R5 256 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 TMX1Q9H3N1 280 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 TDP1Q9NUW8 608 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 FRMD4BQ9Y2L6 1034 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 PRKAB1Q9Y478 270 aa3.6□□□□□ -1.83
CDH8-204ENST00000577536 LRRC3CA6NJW4 275 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 INO80B-WBP1J3KQ70 363 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 GRM6O15303 877 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 YY2O15391 372 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 NDUFS2O75306 463 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 AGFG2O95081 481 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 SRGNP10124 158 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 MTHFD1P11586 935 aaKnown RBP3.59□□□□□ -1.83
CDH8-204ENST00000577536 CDK4P11802 303 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 KCNA2P16389 499 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 CDC42EP1Q00587 391 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 INAVAQ3KP66 663 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 PABPC1LQ4VXU2 614 aaKnown RBP3.59□□□□□ -1.83
CDH8-204ENST00000577536 UTP14CQ5TAP6 766 aaKnown RBP3.59□□□□□ -1.83
CDH8-204ENST00000577536 CLNKQ7Z7G1 428 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 RSPH3Q86UC2 560 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 IFI44Q8TCB0 444 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 RAB24Q969Q5 203 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 TMEM125Q96AQ2 219 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 TMX3Q96JJ7 454 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 INO80BQ9C086 356 aaPredicted RBP3.59□□□□□ -1.83
CDH8-204ENST00000577536 PUS7LQ9H0K6 701 aaKnown RBP3.59□□□□□ -1.83
CDH8-204ENST00000577536 INTS13Q9NVM9 706 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 SLC5A4Q9NY91 659 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 MCM8Q9UJA3 840 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 TUBD1Q9UJT1 453 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 PCDHA13Q9Y5I0 950 aa3.59□□□□□ -1.83
CDH8-204ENST00000577536 PRAMEF33A0A0G2JMD5 474 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 MPPED1O15442 326 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 PROM1O43490 865 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 SGTAO43765 313 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 PRAMEF10O60809 474 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 PROP1O75360 226 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 RBMXL2O75526 392 aaKnown RBP3.58□□□□□ -1.84
CDH8-204ENST00000577536 SBK3P0C264 359 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 IARSP41252 1262 aaKnown RBP3.58□□□□□ -1.84
CDH8-204ENST00000577536 SLC16A1P53985 500 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 RPS7P62081 194 aaKnown RBP3.58□□□□□ -1.84
CDH8-204ENST00000577536 ZNF844Q08AG5 666 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 PGM2L1Q6PCE3 622 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 NECAB2Q7Z6G3 386 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 CBARPQ8N350 705 aaPredicted RBP3.58□□□□□ -1.84
CDH8-204ENST00000577536 IL17RDQ8NFM7 739 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 JADE3Q92613 823 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 HDAC10Q969S8 669 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 UROC1Q96N76 676 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 PACSIN1Q9BY11 444 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 IL17RBQ9NRM6 502 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 ASB6Q9NWX5 421 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 MKS1Q9NXB0 559 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 VSX1Q9NZR4 365 aaPredicted RBP3.58□□□□□ -1.84
CDH8-204ENST00000577536 JKAMPQ9P055 326 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 CTTNBP2NLQ9P2B4 639 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 ARPP21Q9UBL0 812 aaPredicted RBP3.58□□□□□ -1.84
CDH8-204ENST00000577536 CDYLQ9Y232 598 aa3.58□□□□□ -1.84
CDH8-204ENST00000577536 NEU2Q9Y3R4 380 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms