RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 HAUS6Q7Z4H7 955 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 C12orf50Q8NA57 414 aaPredicted RBP9.88□□□□□ -0.83
SMG6-218ENST00000575454 ZSCAN18Q8TBC5 510 aaPredicted RBP9.88□□□□□ -0.83
SMG6-218ENST00000575454 CCDC94Q9BW85 323 aaPredicted RBP9.88□□□□□ -0.83
SMG6-218ENST00000575454 CCDC113Q9H0I3 377 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 SLITRK6Q9H5Y7 841 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 PDRG1Q9NUG6 133 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 TNFSF13BQ9Y275 285 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 CCDC163A0A0D9SF12 145 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 ARHGEF35A5YM69 484 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 TTLL13PA6NNM8 815 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 HEPACAM2A8MVW5 462 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 K7ESF4 209 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 PODXLO00592 558 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 GDF9O60383 454 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 FGF19O95750 216 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 SPATA31C1P0DKV0 1188 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 MYL4P12829 197 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 MUTP22033 750 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 PMLP29590 882 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 MARCKSP29966 332 aaPredicted RBP9.87□□□□□ -0.83
SMG6-218ENST00000575454 VIPR2P41587 438 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 GRM5P41594 1212 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 CCR2P41597 374 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 BRCC3P46736 316 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 SCRN1Q12765 414 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 TWF1Q12792 350 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 CTXN3Q4LDR2 81 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 XKR4Q5GH76 650 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 POTEHQ6S545 545 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 PADI6Q6TGC4 694 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 ALKAL1Q6UXT8 129 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 CACNA2D4Q7Z3S7 1137 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 WDR5BQ86VZ2 330 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 RALGPS2Q86X27 583 aaPredicted RBP9.87□□□□□ -0.83
SMG6-218ENST00000575454 CATSPER3Q86XQ3 398 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 KIFAP3Q92845 792 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 ZSWIM3Q96MP5 696 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 MTMR9Q96QG7 549 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 POLR3CQ9BUI4 534 aaPredicted RBP9.87□□□□□ -0.83
SMG6-218ENST00000575454 CXCL16Q9H2A7 254 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 ORC3Q9UBD5 711 aaPredicted RBP9.87□□□□□ -0.83
SMG6-218ENST00000575454 FBXL5Q9UKA1 691 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.87□□□□□ -0.83
SMG6-218ENST00000575454 ITPR1Q14643 2758 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 CACNA1IQ9P0X4 2223 aa9.87□□□□□ -0.83
SMG6-218ENST00000575454 MAST4O15021 2626 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 MYBPHLA2RUH7 354 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 I3L4J1 428 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 K7ERI5 159 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 ARNTLO00327 626 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 DPYSL4O14531 572 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 SEC24AO95486 1093 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 ZNF806P0C7X5 589 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 KCNE1P15382 129 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 EPHB3P54753 998 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 PLCB2Q00722 1185 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 FCHO2Q0JRZ9 810 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 NR5A1Q13285 461 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 GAS6Q14393 721 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 PTPAQ15257 358 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 EARS2Q5JPH6 523 aaKnown RBP9.86□□□□□ -0.83
SMG6-218ENST00000575454 N4BP2L1Q5TBK1 243 aaPredicted RBP9.86□□□□□ -0.83
SMG6-218ENST00000575454 EEF1DP3Q658K8 133 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 FAM160A2Q8N612 972 aaPredicted RBP9.86□□□□□ -0.83
SMG6-218ENST00000575454 C3orf58Q8NDZ4 430 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 BSNDQ8WZ55 320 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 TNFRSF25Q93038 417 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 LARP6Q9BRS8 491 aaKnown RBP9.86□□□□□ -0.83
SMG6-218ENST00000575454 GOLGA2P5Q9HBQ8 144 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 CEP72Q9P209 647 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 TPCN1Q9ULQ1 816 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 PCDHGA5Q9Y5G8 931 aa9.86□□□□□ -0.83
SMG6-218ENST00000575454 A0A087WWV3 80 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 SPECC1L-ADORA2AF8WAN1 911 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 PFKFB2O60825 505 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 ATG13O75143 517 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 MOSPD3O75425 235 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 AKAP3O75969 853 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 PROS1P07225 676 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 MCF2P10911 925 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 CPB1P15086 417 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 RPA1P27694 616 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 TRIM29Q14134 588 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 ANKRD1Q15327 319 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 TEAD2Q15562 447 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 ARHGAP29Q52LW3 1261 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 NT5DC1Q5TFE4 455 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 HAUS3Q68CZ6 603 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 HEATR6Q6AI08 1181 aaKnown RBP9.85□□□□□ -0.83
SMG6-218ENST00000575454 HS6ST3Q8IZP7 471 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 SUSD3Q96L08 255 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 ACAP3Q96P50 834 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 MRPL4Q9BYD3 311 aaKnown RBP9.85□□□□□ -0.83
SMG6-218ENST00000575454 GJB4Q9NTQ9 266 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 THG1LQ9NWX6 298 aaKnown RBP9.85□□□□□ -0.83
SMG6-218ENST00000575454 OBP2AQ9NY56 170 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 KCNG1Q9UIX4 513 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 PCDHB8Q9UN66 801 aa9.85□□□□□ -0.83
SMG6-218ENST00000575454 RBM19Q9Y4C8 960 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms