RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 TRAPPC3O43617 180 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.57
LITAF-216ENST00000574848 RFPL2O75678 378 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 ZMYND10O75800 440 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 FAM13AO94988 1023 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 ADCY5O95622 1261 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 ADRB2P07550 413 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 RPL17P18621 184 aaKnown RBP11.52□□□□□ -0.57
LITAF-216ENST00000574848 SP100P23497 879 aaPredicted RBP11.52□□□□□ -0.57
LITAF-216ENST00000574848 IGFBP6P24592 240 aaPredicted RBP11.52□□□□□ -0.57
LITAF-216ENST00000574848 RPL9P32969 192 aaKnown RBP11.52□□□□□ -0.57
LITAF-216ENST00000574848 OSTNP61366 133 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 GTF2BQ00403 316 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 PLCB2Q00722 1185 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 MTMR3Q13615 1198 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 KYAT1Q16773 422 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 SLC10A6Q3KNW5 377 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 OTOP3Q7RTS5 596 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.52□□□□□ -0.57
LITAF-216ENST00000574848 KREMEN2Q8NCW0 462 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 RASSF8Q8NHQ8 419 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 SMARCE1Q969G3 411 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 HVCN1Q96D96 273 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 TCHPQ9BT92 498 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 PRKD2Q9BZL6 878 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 MAGEF1Q9HAY2 307 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 BACE2Q9Y5Z0 518 aa11.52□□□□□ -0.57
LITAF-216ENST00000574848 MUC6Q6W4X9 2439 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 ANK1P16157 1881 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 TTC26A0AVF1 554 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 PODXLO00592 558 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 HNRNPDLO14979 420 aaKnown RBP11.51□□□□□ -0.57
LITAF-216ENST00000574848 SYN3O14994 580 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 PPP1R37O75864 691 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 CLTAP09496 248 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 HNRNPA1P09651 372 aaKnown RBP eCLIP11.51□□□□□ -0.57
LITAF-216ENST00000574848 SLFN14P0C7P3 912 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 MSNP26038 577 aaKnown RBP11.51□□□□□ -0.57
LITAF-216ENST00000574848 LRPAP1P30533 357 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 LIG4P49917 911 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 RAB33AQ14088 237 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 CT47A1Q5JQC4 288 aaPredicted RBP11.51□□□□□ -0.57
LITAF-216ENST00000574848 SLC8B1Q6J4K2 584 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 SLC39A4Q6P5W5 647 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 ANKS3Q6ZW76 656 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 RTL10Q7L3V2 364 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 LUZP1Q86V48 1076 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 PALB2Q86YC2 1186 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 MYCT1Q8N699 235 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 SMG7Q92540 1137 aaKnown RBP11.51□□□□□ -0.57
LITAF-216ENST00000574848 STAMQ92783 540 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 ACSF2Q96CM8 615 aaPredicted RBP11.51□□□□□ -0.57
LITAF-216ENST00000574848 MFSD14AQ96MC6 490 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 TSPAN18Q96SJ8 248 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 STRA6Q9BX79 667 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 CUEDC2Q9H467 287 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 EPS15L1Q9UBC2 864 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 SEL1LQ9UBV2 794 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 TSC2P49815 1807 aa11.51□□□□□ -0.57
LITAF-216ENST00000574848 A0A0B4J269 797 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 FRMD3A2A2Y4 597 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 IKBKBO14920 756 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 OGTO15294 1046 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 ADAM12O43184 909 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 TBC1D4O60343 1298 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 N4BP1O75113 896 aaKnown RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 KRT18P05783 430 aaKnown RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 MYL1P05976 194 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 CXCL8P10145 99 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 HARSP12081 509 aaKnown RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 CYP3A5P20815 502 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 TKTP29401 623 aaKnown RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 BRCC3P46736 316 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 AARSP49588 968 aaKnown RBP eCLIP11.5□□□□□ -0.57
LITAF-216ENST00000574848 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 DHX8Q14562 1220 aaKnown RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 ZBTB6Q15916 424 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 SPECC1Q5M775 1068 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 SARM1Q6SZW1 724 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 C11orf57Q6ZUT1 292 aaPredicted RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 CEP57Q86XR8 500 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 GLYCTKQ8IVS8 523 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 MLKLQ8NB16 471 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 C18orf25Q96B23 403 aaPredicted RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 DNAJC19Q96DA6 116 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 BICD1Q96G01 975 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 GTPBP4Q9BZE4 634 aaKnown RBP11.5□□□□□ -0.57
LITAF-216ENST00000574848 RMND1Q9NWS8 449 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 TUBGCP4Q9UGJ1 667 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 SERTAD1Q9UHV2 236 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 STYXL1Q9Y6J8 313 aa11.5□□□□□ -0.57
LITAF-216ENST00000574848 A0A087X0B3 334 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 ACTN4O43707 911 aaKnown RBP11.49□□□□□ -0.57
LITAF-216ENST00000574848 C8AP07357 584 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 SPATA31D3P0C874 917 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 GAP43P17677 238 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 CDC25BP30305 580 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 NMT1P30419 496 aaKnown RBP11.49□□□□□ -0.57
LITAF-216ENST00000574848 TNFSF9P41273 254 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms