RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 TNMDQ9H2S6 317 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 SMOC2Q9H3U7 446 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 TBC1D7Q9P0N9 293 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 AGO2Q9UKV8 859 aaKnown RBP21.41■■□□□ 1.02
SCARF1-208ENST00000574545 HCN4Q9Y3Q4 1203 aa21.41■■□□□ 1.02
SCARF1-208ENST00000574545 MUC6Q6W4X9 2439 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 WDR27A2RRH5 827 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 ACOT2P49753 483 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 MTMR3Q13615 1198 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 FOXD4L6Q3SYB3 417 aaPredicted RBP21.4■■□□□ 1.02
SCARF1-208ENST00000574545 LIN9Q5TKA1 542 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 JADE1Q6IE81 842 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 FOXD4L3Q6VB84 417 aaPredicted RBP21.4■■□□□ 1.02
SCARF1-208ENST00000574545 UBALD2Q8IYN6 164 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 ZNF461Q8TAF7 563 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 PBXIP1Q96AQ6 731 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 MFSD14AQ96MC6 490 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 CUEDC2Q9H467 287 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 ASB7Q9H672 318 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 KCNK12Q9HB15 430 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 PIDD1Q9HB75 910 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 PANK4Q9NVE7 773 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 EPS15L1Q9UBC2 864 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 RCOR1Q9UKL0 485 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 PCDHB8Q9UN66 801 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 PCDHA7Q9UN72 937 aa21.4■■□□□ 1.02
SCARF1-208ENST00000574545 WDFY4Q6ZS81 3184 aa21.39■■□□□ 1.02
SCARF1-208ENST00000574545 PPEF2O14830 753 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 IDEP14735 1019 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 MCM4P33991 863 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 PPM1LQ5SGD2 360 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 CNNM4Q6P4Q7 775 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 SLC7A14Q8TBB6 771 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 KCNG4Q8TDN1 519 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 ACCSQ96QU6 501 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 TRIM9Q9C026 710 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 FBXL5Q9UKA1 691 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 DERAQ9Y315 318 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 ZDHHC9Q9Y397 364 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 PCDHB13Q9Y5F0 798 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 ANK1P16157 1881 aa21.39■■□□□ 1.01
SCARF1-208ENST00000574545 H7C4K7 107 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 PIRO00625 290 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 XPOTO43592 962 aaKnown RBP21.38■■□□□ 1.01
SCARF1-208ENST00000574545 GCNT3O95395 438 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 DNM1Q05193 864 aaKnown RBP21.38■■□□□ 1.01
SCARF1-208ENST00000574545 POSTNQ15063 836 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 GRASPQ7Z6J2 395 aaPredicted RBP21.38■■□□□ 1.01
SCARF1-208ENST00000574545 ZSWIM2Q8NEG5 633 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 APPL2Q8NEU8 664 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 FAM212AQ96EL1 285 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 EXOC7Q9UPT5 735 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 C2CD2Q9Y426 696 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 NOTCH4Q99466 2003 aa21.38■■□□□ 1.01
SCARF1-208ENST00000574545 ANO9A1A5B4 782 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 ARHGEF37A1IGU5 675 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 CCL16O15467 120 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 OAZ2O95190 189 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 NFICP08651 508 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 ATF2P15336 505 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 GBP2P32456 591 aaPredicted RBP21.37■■□□□ 1.01
SCARF1-208ENST00000574545 NTHL1P78549 312 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 ALCAMQ13740 583 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 FBXL6Q8N531 539 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 IQUBQ8NA54 791 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 BEST2Q8NFU1 509 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 POMGNT1Q8WZA1 660 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 DHX58Q96C10 678 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 LRRC27Q9C0I9 530 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.37■■□□□ 1.01
SCARF1-208ENST00000574545 IGSF9Q9P2J2 1179 aa21.37■■□□□ 1.01
SCARF1-208ENST00000574545 SPTLC1O15269 473 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 PRPF6O94906 941 aaKnown RBP21.36■■□□□ 1.01
SCARF1-208ENST00000574545 SEC24AO95486 1093 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 PDGFBP01127 241 aaPredicted RBP21.36■■□□□ 1.01
SCARF1-208ENST00000574545 LAMP2P13473 410 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 GARTP22102 1010 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 LILRA4P59901 499 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 TDGQ13569 410 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 CTXN3Q4LDR2 81 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 C9orf57Q5W0N0 161 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 RESP18Q5W5W9 173 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 ZNF280DQ6N043 979 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 CCDC65Q8IXS2 484 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 TCEAL8Q8IYN2 117 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 GLIS3Q8NEA6 775 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 C7orf25Q9BPX7 421 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 DNMT3BQ9UBC3 853 aaKnown RBP21.36■■□□□ 1.01
SCARF1-208ENST00000574545 CFAP45Q9UL16 551 aa21.36■■□□□ 1.01
SCARF1-208ENST00000574545 XYLBO75191 536 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 FSHRP23945 695 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 WNT7BP56706 349 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 EHHADHQ08426 723 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 TMEM132DQ14C87 1099 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 TPGS2Q68CL5 300 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 EFCAB13Q8IY85 973 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 RSAD2Q8WXG1 361 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 HPS3Q969F9 1004 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 KCNH6Q9H252 994 aa21.35■■□□□ 1.01
SCARF1-208ENST00000574545 TIMM13Q9Y5L4 95 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms