RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 PPP2R3AQ06190 1150 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 TDGQ13569 410 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 MRPL58Q14197 206 aaKnown RBP12.32□□□□□ -0.44
RPAIN-214ENST00000574003 CTXN3Q4LDR2 81 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 PDXDC1Q6P996 788 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 SV2BQ7L1I2 683 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 ZNF720Q7Z2F6 126 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 HSCBQ8IWL3 235 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 UBALD2Q8IYN6 164 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 TMEM105Q8N8V8 129 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 ING5Q8WYH8 240 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 KCNN1Q92952 543 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 HPS3Q969F9 1004 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 RHOBTB2Q9BYZ6 727 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 ZSCAN16Q9H4T2 348 aaPredicted RBP12.32□□□□□ -0.44
RPAIN-214ENST00000574003 EPS15L1Q9UBC2 864 aa12.32□□□□□ -0.44
RPAIN-214ENST00000574003 CPSF3Q9UKF6 684 aaKnown RBP12.32□□□□□ -0.44
RPAIN-214ENST00000574003 SYN3O14994 580 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 SPTLC1O15269 473 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 SPTLC2O15270 562 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 PPP1R37O75864 691 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 C1RP00736 705 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 HNRNPA1P09651 372 aaKnown RBP eCLIP12.31□□□□□ -0.44
RPAIN-214ENST00000574003 ADSSP30520 456 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 LRPAP1P30533 357 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 TXLNAP40222 546 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 TCF15Q12870 199 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 SLC5A9Q2M3M2 681 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 SCARA3Q6AZY7 606 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 SLC8B1Q6J4K2 584 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 PARM1Q6UWI2 310 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-214ENST00000574003 CYP26C1Q6V0L0 522 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 ALYREFQ86V81 257 aaKnown RBP12.31□□□□□ -0.44
RPAIN-214ENST00000574003 SLC44A3Q8N4M1 653 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 GLIS3Q8NEA6 775 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 FLCNQ8NFG4 579 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 MRPL44Q9H9J2 332 aaKnown RBP12.31□□□□□ -0.44
RPAIN-214ENST00000574003 PLEKHA5Q9HAU0 1116 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 FAM86C1Q9NVL1 165 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 DAXXQ9UER7 740 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-214ENST00000574003 AGO2Q9UKV8 859 aaKnown RBP12.31□□□□□ -0.44
RPAIN-214ENST00000574003 UBQLN1Q9UMX0 589 aaKnown RBP12.31□□□□□ -0.44
RPAIN-214ENST00000574003 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 DUSP12Q9UNI6 340 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 ARIH1Q9Y4X5 557 aaPredicted RBP12.31□□□□□ -0.44
RPAIN-214ENST00000574003 NUMBLQ9Y6R0 609 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 COL4A3Q01955 1670 aa12.31□□□□□ -0.44
RPAIN-214ENST00000574003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-214ENST00000574003 GOLGA8IPA6NC78 632 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 GOLGA8JA6NMD2 632 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 PRRG1O14668 218 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 PI15O43692 258 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 PRPF6O94906 941 aaKnown RBP12.3□□□□□ -0.44
RPAIN-214ENST00000574003 ABLIM3O94929 683 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 GCNT3O95395 438 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 VNN2O95498 520 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 ADRB2P07550 413 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 NPR3P17342 541 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 ADCY1Q08828 1119 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 HTR4Q13639 388 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 CWF19L1Q69YN2 538 aaKnown RBP12.3□□□□□ -0.44
RPAIN-214ENST00000574003 SHC4Q6S5L8 630 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 RNF19BQ6ZMZ0 732 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 CCDC73Q6ZRK6 1079 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 EFCAB13Q8IY85 973 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 SIX5Q8N196 739 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 ZNF461Q8TAF7 563 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 POMGNT1Q8WZA1 660 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 FGF13Q92913 245 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 FGF14Q92915 247 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 DHX58Q96C10 678 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 SAAL1Q96ER3 474 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 PGLYRP2Q96PD5 576 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 TMEM209Q96SK2 561 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 STRA6Q9BX79 667 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 PANK4Q9NVE7 773 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 IGSF9Q9P2J2 1179 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 FBXL21Q9UKT6 434 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 CA14Q9ULX7 337 aa12.3□□□□□ -0.44
RPAIN-214ENST00000574003 KRBA1A5PL33 1030 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 ANHXE9PGG2 379 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 H7C4K7 107 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 M0QZQ0 153 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 XYLBO75191 536 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 F13A1P00488 732 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 HSP90AA1P07900 732 aaKnown RBP12.29□□□□□ -0.44
RPAIN-214ENST00000574003 RHOP08100 348 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 ZSCAN22P10073 491 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-214ENST00000574003 CEBPBP17676 345 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 CASP1P29466 404 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 HOXA9P31269 272 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 AARSP49588 968 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPAIN-214ENST00000574003 TMEM132DQ14C87 1099 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 E2F4Q16254 413 aa12.29□□□□□ -0.44
RPAIN-214ENST00000574003 PABPC1LQ4VXU2 614 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms