RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 PLCD3Q8N3E9 789 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 ZSWIM2Q8NEG5 633 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 BEST2Q8NFU1 509 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 SUSD3Q96L08 255 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 FAM213AQ9BRX8 229 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 TRIM9Q9C026 710 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 LRRC27Q9C0I9 530 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 CUEDC2Q9H467 287 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 KBTBD4Q9NVX7 518 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 ZDHHC9Q9Y397 364 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 STYXL1Q9Y6J8 313 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 PLXNA3P51805 1871 aa19.31■□□□□ 0.68
CTDNEP1-207ENST00000572043 H7C4K7 107 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 N4BP1O75113 896 aaKnown RBP19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 CYP3A5P20815 502 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 ROR1Q01973 937 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 SPATA1Q5VX52 437 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 ATL3Q6DD88 541 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 CYP26C1Q6V0L0 522 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 DSTYKQ6XUX3 929 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 CD302Q8IX05 232 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 ST13P5Q8NFI4 369 aaPredicted RBP19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 BLZF1Q9H2G9 400 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 PCIF1Q9H4Z3 704 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 FBXL5Q9UKA1 691 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 PCDHB8Q9UN66 801 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 HCN4Q9Y3Q4 1203 aa19.3■□□□□ 0.68
CTDNEP1-207ENST00000572043 WDR27A2RRH5 827 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 GOLGA8IPA6NC78 632 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 GOLGA8JA6NMD2 632 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 ADRB2P07550 413 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 AFMP43652 599 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 AMPD3Q01432 767 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 SIGLEC14Q08ET2 396 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 MTMR3Q13615 1198 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 POSTNQ15063 836 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 RESP18Q5W5W9 173 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 CRELD2Q6UXH1 353 aaPredicted RBP19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 APPL2Q8NEU8 664 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 PBXIP1Q96AQ6 731 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 MYADMQ96S97 322 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 CBWD1Q9BRT8 395 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 RCOR1Q9UKL0 485 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 SORCS3Q9UPU3 1222 aa19.29■□□□□ 0.68
CTDNEP1-207ENST00000572043 WNT7BP56706 349 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 ALCAMQ13740 583 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 C9orf57Q5W0N0 161 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 SLC8B1Q6J4K2 584 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 ZNF280DQ6N043 979 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 GRAMD1CQ8IYS0 662 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 RHOBTB2Q9BYZ6 727 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 HCFC1R1Q9NWW0 138 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 KCNH3Q9ULD8 1083 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 MYH11P35749 1972 aa19.28■□□□□ 0.68
CTDNEP1-207ENST00000572043 PRRG1O14668 218 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 SPTLC1O15269 473 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 TBC1D4O60343 1298 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 XYLBO75191 536 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 HNRNPA1P09651 372 aaKnown RBP eCLIP19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 FSHRP23945 695 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 ELF1P32519 619 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 KRT85P78386 507 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 YWHAHQ04917 246 aaPredicted RBP19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 MRPL58Q14197 206 aaKnown RBP19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 ARMCX5Q6P1M9 558 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 EFCAB13Q8IY85 973 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 ZNF461Q8TAF7 563 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 RSAD2Q8WXG1 361 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 SPATA32Q96LK8 384 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 TSPAN18Q96SJ8 248 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 C7orf25Q9BPX7 421 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 ASB7Q9H672 318 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 TMEM206Q9H813 350 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 CYP4F11Q9HBI6 524 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 SERTAD1Q9UHV2 236 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 DERAQ9Y315 318 aa19.27■□□□□ 0.68
CTDNEP1-207ENST00000572043 C5orf42Q9H799 3197 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 M0QZQ0 153 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 PAPLNO95428 1278 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 OR4Q2P0C623 313 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 CPB1P15086 417 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 HOXA9P31269 272 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 STXBP4Q6ZWJ1 553 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 USP37Q86T82 979 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 LEO1Q8WVC0 666 aaPredicted RBP19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 ASIC4Q96FT7 647 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 FAM84AQ96KN4 292 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 MAGEF1Q9HAY2 307 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 KCNK12Q9HB15 430 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 DPP3Q9NY33 737 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 RBAKQ9NYW8 714 aaPredicted RBP19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 C2CD2Q9Y426 696 aa19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.26■□□□□ 0.67
CTDNEP1-207ENST00000572043 A0A1B0GVL5 298 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 ABLIM3O94929 683 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 IL18RAPO95256 599 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 SEC24AO95486 1093 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 PDGFBP01127 241 aaPredicted RBP19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 GARTP22102 1010 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 AARSP49588 968 aaKnown RBP eCLIP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms