RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 FGF13Q92913 245 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 ZMAT2Q96NC0 199 aaKnown RBP10.6□□□□□ -0.71
CIITA-207ENST00000571545 MSTO1Q9BUK6 570 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 CXCL16Q9H2A7 254 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 ASB7Q9H672 318 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 BLOC1S4Q9NUP1 217 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 AFF4Q9UHB7 1163 aaKnown RBP10.6□□□□□ -0.71
CIITA-207ENST00000571545 PCDHB8Q9UN66 801 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 EXOC7Q9UPT5 735 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 DERAQ9Y315 318 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 NUMBLQ9Y6R0 609 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 MYH15Q9Y2K3 1946 aa10.6□□□□□ -0.71
CIITA-207ENST00000571545 A0A0B4J269 797 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 OR6C75A6NL08 312 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 K7ELQ4 463 aaPredicted RBP10.59□□□□□ -0.71
CIITA-207ENST00000571545 M0QZQ0 153 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 STK25O00506 426 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 MICAL2O94851 1124 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 ABLIM3O94929 683 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 CFHP08603 1231 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 ODC1P11926 461 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 CPB1P15086 417 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 GAP43P17677 238 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 PTPN2P17706 415 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 GTF2BQ00403 316 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 MRPL58Q14197 206 aaKnown RBP10.59□□□□□ -0.71
CIITA-207ENST00000571545 DHX8Q14562 1220 aaKnown RBP10.59□□□□□ -0.71
CIITA-207ENST00000571545 POSTNQ15063 836 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 RRAGBQ5VZM2 374 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 CWF19L1Q69YN2 538 aaKnown RBP10.59□□□□□ -0.71
CIITA-207ENST00000571545 CD300LGQ6UXG3 332 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 TCEAL8Q8IYN2 117 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 TMEM105Q8N8V8 129 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 DDX12PQ92771 950 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 C18orf25Q96B23 403 aaPredicted RBP10.59□□□□□ -0.71
CIITA-207ENST00000571545 ZBTB45Q96K62 511 aaPredicted RBP10.59□□□□□ -0.71
CIITA-207ENST00000571545 LRRC27Q9C0I9 530 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 SMOC2Q9H3U7 446 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 ARHGEF3Q9NR81 526 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 DSEQ9UL01 958 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 MRPS23Q9Y3D9 190 aaKnown RBP10.59□□□□□ -0.71
CIITA-207ENST00000571545 SRPRBQ9Y5M8 271 aaKnown RBP10.59□□□□□ -0.71
CIITA-207ENST00000571545 INSL5Q9Y5Q6 135 aa10.59□□□□□ -0.71
CIITA-207ENST00000571545 NPHP3-ACAD11A0A0J9YXS1 232 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 WDR27A2RRH5 827 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 PROB1E7EW31 1015 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 I3L4J1 428 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 ADAM12O43184 909 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 TBC1D4O60343 1298 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 OAZ2O95190 189 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 ADRB2P07550 413 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 RHOP08100 348 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 TYMPP19971 482 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 SYT1P21579 422 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 MAGEA9P43362 315 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 AARSP49588 968 aaKnown RBP eCLIP10.58□□□□□ -0.72
CIITA-207ENST00000571545 PRKCQQ04759 706 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 TMEM132DQ14C87 1099 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 CYP4A22Q5TCH4 519 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 RSPO2Q6UXX9 243 aaPredicted RBP10.58□□□□□ -0.72
CIITA-207ENST00000571545 STXBP4Q6ZWJ1 553 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 PDZD4Q76G19 769 aaPredicted RBP10.58□□□□□ -0.72
CIITA-207ENST00000571545 SV2BQ7L1I2 683 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 NT5DC4Q86YG4 428 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 CCDC105Q8IYK2 499 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 FEZF2Q8TBJ5 459 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 TBC1D17Q9HA65 648 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 CYP4F11Q9HBI6 524 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 TUBGCP4Q9UGJ1 667 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 C2CD2Q9Y426 696 aa10.58□□□□□ -0.72
CIITA-207ENST00000571545 MIA3Q5JRA6 1907 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 H0Y858 1186 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 STX6O43752 255 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 NARSO43776 548 aaKnown RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 FAM189A1O60320 539 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 ECI2O75521 394 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 IL18RAPO95256 599 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 FGF19O95750 216 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 NBL1P41271 181 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 STAT6P42226 847 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 VASPP50552 380 aaPredicted RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 ARPP19P56211 112 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 ADCY1Q08828 1119 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 SMARCB1Q12824 385 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 RESTQ13127 1097 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 MYBPC2Q14324 1141 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 PTPAQ15257 358 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 ZBTB6Q15916 424 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 ENOX2Q16206 610 aaKnown RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 SEZ6Q53EL9 994 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 SPATA1Q5VX52 437 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 ADALQ6DHV7 355 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 ARMCX5Q6P1M9 558 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 ZC3H14Q6PJT7 736 aaKnown RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 DSTYKQ6XUX3 929 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 GPR152Q8TDT2 470 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 RSAD2Q8WXG1 361 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms