RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CELSR2Q9HCU4 2923 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 PNMA6FA0A0J9YX94 578 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 A0A1B0GTL3 188 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 MEIS2O14770 477 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 CHADO15335 359 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 MAGEB2O15479 319 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 ZNF623O75123 536 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 ATG13O75143 517 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 MOSPD3O75425 235 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 GJB3O75712 270 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 DKK1O94907 266 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 EGFP01133 1207 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 PCP11498 1178 aaKnown RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 HLA-EP13747 358 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 CD46P15529 392 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 TMOD1P28289 359 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 RAB27AP51159 221 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 RHDQ02161 417 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 CREMQ03060 361 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 NFATC3Q12968 1075 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 C2orf27AQ580R0 203 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 NAIF1Q69YI7 327 aaPredicted RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 SWSAP1Q6NVH7 229 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 C1orf228Q6PIY5 440 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 ABHD15Q6UXT9 468 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 CCDC60Q8IWA6 550 aaPredicted RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 SPACA3Q8IXA5 215 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 FAM177A1Q8N128 213 aaPredicted RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 DEFB119Q8N690 84 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 LINC01465Q8N7H1 131 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 ENAHQ8N8S7 591 aaPredicted RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 LNX1Q8TBB1 728 aaPredicted RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 ZSCAN18Q8TBC5 510 aaPredicted RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 DEPDC1BQ8WUY9 529 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 PIBF1Q8WXW3 757 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 MRRFQ96E11 262 aaKnown RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 CHFRQ96EP1 664 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 MSANTD3Q96H12 275 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 GPATCH3Q96I76 525 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 TMEM209Q96SK2 561 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 COLEC11Q9BWP8 271 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 RIOX1Q9H6W3 641 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 RSAD1Q9HA92 442 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 PRDM16Q9HAZ2 1276 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 CAPN10Q9HC96 672 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 KCNH7Q9NS40 1196 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 PILRBQ9UKJ0 227 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 SLC6A14Q9UN76 642 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 PIN4Q9Y237 131 aaKnown RBP7.77□□□□□ -1.17
CHD3-213ENST00000571249 PCDHB2Q9Y5E7 798 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 NFASCO94856 1347 aa7.77□□□□□ -1.17
CHD3-213ENST00000571249 BAZ2BQ9UIF8 2168 aaKnown RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 DDX39AO00148 427 aaKnown RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 PIK3CDO00329 1044 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 ARHGAP33O14559 1287 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 TNFRSF10BO14763 440 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 CYTH3O43739 400 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 CCNE2O96020 404 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 POU2F2P09086 479 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 PTPN2P17706 415 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 U2AF2P26368 475 aaKnown RBP eCLIP7.76□□□□□ -1.17
CHD3-213ENST00000571249 CLDN6P56747 220 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 KCNH2Q12809 1159 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 ITGB3BPQ13352 177 aaPredicted RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 DMC1Q14565 340 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 PKDCCQ504Y2 493 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 CCDC157Q569K6 752 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 C6orf132Q5T0Z8 1188 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 C20orf194Q5TEA3 1177 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 GLRX5Q86SX6 157 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 CEP57Q86XR8 500 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 YAF2Q8IY57 180 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 GPR65Q8IYL9 337 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 CMTR1Q8N1G2 835 aaKnown RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 GCOM2Q9BZD3 368 aaPredicted RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 RNF41Q9H4P4 317 aaPredicted RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 ZNF768Q9H5H4 540 aaKnown RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 AVENQ9NQS1 362 aaPredicted RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 PCOLCE2Q9UKZ9 415 aa7.76□□□□□ -1.17
CHD3-213ENST00000571249 HEMK1Q9Y5R4 338 aaPredicted RBP7.76□□□□□ -1.17
CHD3-213ENST00000571249 PCDH15Q96QU1 1955 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 BLACEA4D250 179 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 ANTXRLA6NF34 631 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 NR1I2O75469 434 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 SERPINF2P08697 491 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 SFPQP23246 707 aaKnown RBP eCLIP7.75□□□□□ -1.17
CHD3-213ENST00000571249 OR1D2P34982 312 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 DSC1Q08554 894 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 FCHO2Q0JRZ9 810 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 MYO1EQ12965 1108 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 DRP2Q13474 957 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 KRTAP21-3Q3LHN1 58 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 TMEM196Q5HYL7 178 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 ANO7Q6IWH7 933 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 LPCAT2Q7L5N7 544 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 MRPL10Q7Z7H8 261 aaKnown RBP7.75□□□□□ -1.17
CHD3-213ENST00000571249 RPLP0P6Q8NHW5 317 aa7.75□□□□□ -1.17
CHD3-213ENST00000571249 SETD7Q8WTS6 366 aaKnown RBP7.75□□□□□ -1.17
CHD3-213ENST00000571249 TRPV4Q9HBA0 871 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms