RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 SPAG1Q07617 926 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 STRN3Q13033 797 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 FZD5Q13467 585 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 FAM78AQ5JUQ0 283 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 KCTD17Q8N5Z5 321 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 KCNN1Q92952 543 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 CLDN23Q96B33 292 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 ELSPBP1Q96BH3 223 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 ZSWIM3Q96MP5 696 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 AFF4Q9UHB7 1163 aaKnown RBP19.16■□□□□ 0.66
CIITA-206ENST00000571190 CLDN3O15551 220 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 FAM189A1O60320 539 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 MICAL2O94851 1124 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 VNN2O95498 520 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 TNFSF9P41273 254 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 ID4P47928 161 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 SMTNP53814 917 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 NCKAP1LP55160 1127 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 ADCY1Q08828 1119 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 ZNF280DQ6N043 979 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 RNF19BQ6ZMZ0 732 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 TPRG1Q6ZUI0 275 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 SUMF1Q8NBK3 374 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 TMX3Q96JJ7 454 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 BCO2Q9BYV7 579 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 PLEKHA5Q9HAU0 1116 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 HEBP1Q9NRV9 189 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 PCDHB8Q9UN66 801 aa19.15■□□□□ 0.66
CIITA-206ENST00000571190 RIF1Q5UIP0 2472 aaKnown RBP19.15■□□□□ 0.66
CIITA-206ENST00000571190 MTCL1Q9Y4B5 1905 aaKnown RBP19.15■□□□□ 0.66
CIITA-206ENST00000571190 M0QZQ0 153 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 LRPAP1P30533 357 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 AARSP49588 968 aaKnown RBP eCLIP19.14■□□□□ 0.65
CIITA-206ENST00000571190 FOXK2Q01167 660 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 ZBTB41Q5SVQ8 909 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 ARL6IP4Q66PJ3 421 aaKnown RBP19.14■□□□□ 0.65
CIITA-206ENST00000571190 ZNF687Q8N1G0 1237 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 APPL2Q8NEU8 664 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 BEST2Q8NFU1 509 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 ASB16Q96NS5 453 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 SPATA6Q9NWH7 488 aaPredicted RBP19.14■□□□□ 0.65
CIITA-206ENST00000571190 KCND2Q9NZV8 630 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 KCNG1Q9UIX4 513 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 FBXO4Q9UKT5 387 aa19.14■□□□□ 0.65
CIITA-206ENST00000571190 TIMM13Q9Y5L4 95 aaPredicted RBP19.14■□□□□ 0.65
CIITA-206ENST00000571190 ZNF197O14709 1029 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 OAZ2O95190 189 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 CLTAP09496 248 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 GJB2P29033 226 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 GUCY2FP51841 1108 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 EPHA5P54756 1037 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 TWF1Q12792 350 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 GRM2Q14416 872 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 RABEP1Q15276 862 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 ZNF528Q3MIS6 628 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 ZC3H14Q6PJT7 736 aaKnown RBP19.13■□□□□ 0.65
CIITA-206ENST00000571190 HAUS6Q7Z4H7 955 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 DCLK2Q8N568 766 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 CRISPLD1Q9H336 500 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 MAFFQ9ULX9 164 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 KIF3AQ9Y496 699 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 NCANO14594 1321 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 GVINP1Q7Z2Y8 2422 aa19.13■□□□□ 0.65
CIITA-206ENST00000571190 DOCK6Q96HP0 2047 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 NOTCH4Q99466 2003 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 LACTBL1A8MY62 500 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 LAMTOR5O43504 91 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 ADRB2P07550 413 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 OR4Q2P0C623 313 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 GJA1P17302 382 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 CYP3A5P20815 502 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 ENOX2Q16206 610 aaKnown RBP19.12■□□□□ 0.65
CIITA-206ENST00000571190 VITQ6UXI7 678 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 PDZD4Q76G19 769 aaPredicted RBP19.12■□□□□ 0.65
CIITA-206ENST00000571190 MAP4K3Q8IVH8 894 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 KIAA2013Q8IYS2 634 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 NELL1Q92832 810 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 RMDN1Q96DB5 314 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 KIF12Q96FN5 646 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 NELL2Q99435 816 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 REEP2Q9BRK0 252 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 LRRC3Q9BY71 257 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 ZFP14Q9HCL3 533 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 BLOC1S4Q9NUP1 217 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 LARSQ9P2J5 1176 aaKnown RBP19.12■□□□□ 0.65
CIITA-206ENST00000571190 FAM186AA6NE01 2351 aa19.12■□□□□ 0.65
CIITA-206ENST00000571190 PPEF2O14830 753 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 PIGRP01833 764 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 CPB1P15086 417 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 MARCKSP29966 332 aaPredicted RBP19.11■□□□□ 0.65
CIITA-206ENST00000571190 VIPR2P41587 438 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 MAGEA9P43362 315 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 RPS9P46781 194 aaKnown RBP19.11■□□□□ 0.65
CIITA-206ENST00000571190 ZNF131P52739 623 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 YWHAHQ04917 246 aaPredicted RBP19.11■□□□□ 0.65
CIITA-206ENST00000571190 CSTF1Q05048 431 aaKnown RBP19.11■□□□□ 0.65
CIITA-206ENST00000571190 GRIN1Q05586 938 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 CYP4A22Q5TCH4 519 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 SLC39A4Q6P5W5 647 aa19.11■□□□□ 0.65
CIITA-206ENST00000571190 ZNF852Q6ZMS4 543 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms