RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 FCARP24071 287 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 GDI1P31150 447 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 GRM5P41594 1212 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 NRLP54845 237 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 LMNB2Q03252 620 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 PTGDRQ13258 359 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 ECM1Q16610 540 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 PRSS36Q5K4E3 855 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 CYP4A22Q5TCH4 519 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 ALKAL1Q6UXT8 129 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 PDZD4Q76G19 769 aaPredicted RBP15.67■□□□□ 0.1
CIITA-205ENST00000571186 TCEAL8Q8IYN2 117 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 ELMOD1Q8N336 334 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 IRF7Q92985 503 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 SNX21Q969T3 373 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 ZNF512Q96ME7 567 aaPredicted RBP15.67■□□□□ 0.1
CIITA-205ENST00000571186 ACO2Q99798 780 aaKnown RBP15.67■□□□□ 0.1
CIITA-205ENST00000571186 TCHPQ9BT92 498 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 CDT1Q9H211 546 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 LMAN1LQ9HAT1 526 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 GMEB2Q9UKD1 530 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 RAB23Q9ULC3 237 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 NUB1Q9Y5A7 615 aa15.67■□□□□ 0.1
CIITA-205ENST00000571186 DCDC2BA2VCK2 349 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 NRG2O14511 850 aaPredicted RBP15.66■□□□□ 0.1
CIITA-205ENST00000571186 SYN3O14994 580 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 MUTP22033 750 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 CCR2P41597 374 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 PEX3P56589 373 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 PPP2R5DQ14738 602 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 IL17AQ16552 155 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 LPAL2Q16609 132 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 ZNF568Q3ZCX4 644 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 CTXN3Q4LDR2 81 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 XKR4Q5GH76 650 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 IQCEQ6IPM2 695 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 HS6ST3Q8IZP7 471 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 FAM3CQ92520 227 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 ZSWIM3Q96MP5 696 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 ZMAT2Q96NC0 199 aaKnown RBP15.66■□□□□ 0.1
CIITA-205ENST00000571186 ASB16Q96NS5 453 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 ACAP3Q96P50 834 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 CHRDQ9H2X0 955 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 ZNF334Q9HCZ1 680 aaPredicted RBP15.66■□□□□ 0.1
CIITA-205ENST00000571186 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.66■□□□□ 0.1
CIITA-205ENST00000571186 FBXL5Q9UKA1 691 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 KIAA1024Q9UPX6 916 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 INSL5Q9Y5Q6 135 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 ATG2BQ96BY7 2078 aa15.66■□□□□ 0.1
CIITA-205ENST00000571186 CNOT1A5YKK6 2376 aaKnown RBP15.65■□□□□ 0.1
CIITA-205ENST00000571186 MICAL2O94851 1124 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 MYL4P12829 197 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 PSMC3P17980 439 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 RPL9P32969 192 aaKnown RBP15.65■□□□□ 0.1
CIITA-205ENST00000571186 VIPR2P41587 438 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 ORC2Q13416 577 aaPredicted RBP15.65■□□□□ 0.1
CIITA-205ENST00000571186 MRPL58Q14197 206 aaKnown RBP15.65■□□□□ 0.1
CIITA-205ENST00000571186 TPGS2Q68CL5 300 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 HAUS3Q68CZ6 603 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 VITQ6UXI7 678 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 MAP4K3Q8IVH8 894 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 ZNF687Q8N1G0 1237 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 SMARCD2Q92925 531 aa15.65■□□□□ 0.1
CIITA-205ENST00000571186 C18orf25Q96B23 403 aaPredicted RBP15.65■□□□□ 0.1
CIITA-205ENST00000571186 INTS4Q96HW7 963 aaKnown RBP15.65■□□□□ 0.1
CIITA-205ENST00000571186 TARS2Q9BW92 718 aaKnown RBP15.65■□□□□ 0.1
CIITA-205ENST00000571186 MRPL4Q9BYD3 311 aaKnown RBP15.65■□□□□ 0.1
CIITA-205ENST00000571186 ZNF263O14978 683 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 HARSP12081 509 aaKnown RBP15.64■□□□□ 0.09
CIITA-205ENST00000571186 KCNE1P15382 129 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 GJA1P17302 382 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 SYT1P21579 422 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 TGM1P22735 817 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 MARCKSP29966 332 aaPredicted RBP15.64■□□□□ 0.09
CIITA-205ENST00000571186 MAP1BP46821 2468 aaKnown RBP15.64■□□□□ 0.09
CIITA-205ENST00000571186 NPTX2P47972 431 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 SPEM2Q0P670 501 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 TWF1Q12792 350 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 RILPL1Q5EBL4 403 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 HSCBQ8IWL3 235 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 CELF5Q8N6W0 485 aaKnown RBP15.64■□□□□ 0.09
CIITA-205ENST00000571186 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 RTKNQ9BST9 563 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 TMEM134Q9H6X4 195 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 PTPRHQ9HD43 1115 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 PARD6AQ9NPB6 346 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 KMT5AQ9NQR1 393 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 DDX19AQ9NUU7 478 aaKnown RBP15.64■□□□□ 0.09
CIITA-205ENST00000571186 CEP72Q9P209 647 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 LRWD1Q9UFC0 647 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 PIAS3Q9Y6X2 628 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 SPAG17Q6Q759 2223 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 CHD8Q9HCK8 2581 aa15.64■□□□□ 0.09
CIITA-205ENST00000571186 KIF26AQ9ULI4 1882 aaPredicted RBP15.63■□□□□ 0.09
CIITA-205ENST00000571186 COL4A2P08572 1712 aa15.63■□□□□ 0.09
CIITA-205ENST00000571186 KMT2BQ9UMN6 2715 aaPredicted RBP15.63■□□□□ 0.09
CIITA-205ENST00000571186 PP2D1A8MPX8 630 aa15.63■□□□□ 0.09
CIITA-205ENST00000571186 KRT37O76014 449 aa15.63■□□□□ 0.09
CIITA-205ENST00000571186 MCF2P10911 925 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms