RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 TGM5O43548 720 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 LDHAP00338 332 aaKnown RBP13.76□□□□□ -0.21
TVP23B-204ENST00000571018 RPL17P18621 184 aaKnown RBP13.76□□□□□ -0.21
TVP23B-204ENST00000571018 TKTP29401 623 aaKnown RBP13.76□□□□□ -0.21
TVP23B-204ENST00000571018 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
TVP23B-204ENST00000571018 SYKP43405 635 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 NDUFA8P51970 172 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 PSMD5Q16401 504 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 RARS2Q5T160 578 aaKnown RBP13.76□□□□□ -0.21
TVP23B-204ENST00000571018 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 JADE1Q6IE81 842 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 KANK3Q6NY19 840 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 ELMSAN1Q6PJG2 1045 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 ANKS3Q6ZW76 656 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 PALB2Q86YC2 1186 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 GLYCTKQ8IVS8 523 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 GRAMD1CQ8IYS0 662 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 HDAC7Q8WUI4 952 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 SUSD3Q96L08 255 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 NECTIN4Q96NY8 510 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 GDPD2Q9HCC8 539 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 MAN1C1Q9NR34 630 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 NUB1Q9Y5A7 615 aa13.76□□□□□ -0.21
TVP23B-204ENST00000571018 SYN3O14994 580 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 KIAA0391O15091 583 aaKnown RBP13.75□□□□□ -0.21
TVP23B-204ENST00000571018 MYL1P05976 194 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 NFICP08651 508 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 HOXD13P35453 343 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 MTHFRP42898 656 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 ATAT1Q5SQI0 421 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 TMC5Q6UXY8 1006 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 GPR149Q86SP6 731 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 BEST2Q8NFU1 509 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 CMASQ8NFW8 434 aaPredicted RBP13.75□□□□□ -0.21
TVP23B-204ENST00000571018 RIPOR3Q96MK2 946 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 CBWD1Q9BRT8 395 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 FAM213AQ9BRX8 229 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 MTRRQ9UBK8 725 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 CDH22Q9UJ99 828 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 C2CD2Q9Y426 696 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 BACE2Q9Y5Z0 518 aa13.75□□□□□ -0.21
TVP23B-204ENST00000571018 PDCD11Q14690 1871 aaKnown RBP13.74□□□□□ -0.21
TVP23B-204ENST00000571018 UBE4BO95155 1302 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 LOC730098B7Z3J9 87 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 ADAM12O43184 909 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 KLRC4O43908 158 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 EXTL3O43909 919 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 IL18RAPO95256 599 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 PAPLNO95428 1278 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 SPATA31D3P0C874 917 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 MCM4P33991 863 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 AARSP49588 968 aaKnown RBP eCLIP13.74□□□□□ -0.21
TVP23B-204ENST00000571018 GUCY2FP51841 1108 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 RAB33AQ14088 237 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 MRPL58Q14197 206 aaKnown RBP13.74□□□□□ -0.21
TVP23B-204ENST00000571018 TMEM132DQ14C87 1099 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 ARMCX5Q6P1M9 558 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 SPATA31D4Q6ZUB0 917 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 NT5DC4Q86YG4 428 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 BRSK2Q8IWQ3 736 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 TMEM130Q8N3G9 435 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 FSIP1Q8NA03 581 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 KREMEN2Q8NCW0 462 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 ZSWIM2Q8NEG5 633 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 SCFD1Q8WVM8 642 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 SAAL1Q96ER3 474 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 GOLPH3LQ9H4A5 285 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 PCIF1Q9H4Z3 704 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 POMKQ9H5K3 350 aa13.74□□□□□ -0.21
TVP23B-204ENST00000571018 SPTBN5Q9NRC6 3674 aaKnown RBP13.74□□□□□ -0.21
TVP23B-204ENST00000571018 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 ANO9A1A5B4 782 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 GOLGA8IPA6NC78 632 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 GOLGA8JA6NMD2 632 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 M0QZQ0 153 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 PIRO00625 290 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 TGFB1I1O43294 461 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 TBC1D4O60343 1298 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 WEE2P0C1S8 567 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 PAX3P23760 479 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 OR1D2P34982 312 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 SNRPFP62306 86 aaKnown RBP13.73□□□□□ -0.21
TVP23B-204ENST00000571018 PSMD2Q13200 908 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 BMT2Q1RMZ1 405 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
TVP23B-204ENST00000571018 SLC8B1Q6J4K2 584 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 RSPO2Q6UXX9 243 aaPredicted RBP13.73□□□□□ -0.21
TVP23B-204ENST00000571018 CYP26C1Q6V0L0 522 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 KRBA2Q6ZNG9 492 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 EFCAB13Q8IY85 973 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 GPD1LQ8N335 351 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 FEZF2Q8TBJ5 459 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.21
TVP23B-204ENST00000571018 RPGRIP1Q96KN7 1286 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 SLC39A2Q9NP94 309 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 ZDHHC7Q9NXF8 308 aa13.73□□□□□ -0.21
TVP23B-204ENST00000571018 FBXW11Q9UKB1 542 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms