RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 STK24Q9Y6E0 443 aa20.79■□□□□ 0.92
SCARF1-204ENST00000570902 MCF2P10911 925 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 TDGF1P13385 188 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 TGM1P22735 817 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 CCR2P41597 374 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 NPTX2P47972 431 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 FXR2P51116 673 aaKnown RBP eCLIP20.78■□□□□ 0.92
SCARF1-204ENST00000570902 PEX3P56589 373 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 DMP1Q13316 513 aaPredicted RBP20.78■□□□□ 0.92
SCARF1-204ENST00000570902 LAIR1Q6GTX8 287 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 VITQ6UXI7 678 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 APPL2Q8NEU8 664 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 SUSD3Q96L08 255 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 ZMAT2Q96NC0 199 aaKnown RBP20.78■□□□□ 0.92
SCARF1-204ENST00000570902 TCHPQ9BT92 498 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 FOXP1Q9H334 677 aaPredicted RBP20.78■□□□□ 0.92
SCARF1-204ENST00000570902 LMAN1LQ9HAT1 526 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 ASAH2Q9NR71 780 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 CNTN3Q9P232 1028 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 LRWD1Q9UFC0 647 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 AFF4Q9UHB7 1163 aaKnown RBP20.78■□□□□ 0.92
SCARF1-204ENST00000570902 KIAA1024Q9UPX6 916 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 PIAS3Q9Y6X2 628 aa20.78■□□□□ 0.92
SCARF1-204ENST00000570902 TRIP11Q15643 1979 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 ZNF263O14978 683 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 GUCY1B3Q02153 619 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 ECM1Q16610 540 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 TTC38Q5R3I4 469 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 C1orf228Q6PIY5 440 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 E2F7Q96AV8 911 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 MSANTD3Q96H12 275 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 DRC1Q96MC2 740 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 ZSWIM3Q96MP5 696 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 GPR88Q9GZN0 384 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 TRPV4Q9HBA0 871 aa20.77■□□□□ 0.92
SCARF1-204ENST00000570902 RBM19Q9Y4C8 960 aaKnown RBP20.77■□□□□ 0.92
SCARF1-204ENST00000570902 LRP3O75074 770 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 MCM4P33991 863 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 EPHA5P54756 1037 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 MLLT6P55198 1093 aaPredicted RBP20.76■□□□□ 0.91
SCARF1-204ENST00000570902 TWF1Q12792 350 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 MPZL3Q6UWV2 235 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 ZSCAN18Q8TBC5 510 aaPredicted RBP20.76■□□□□ 0.91
SCARF1-204ENST00000570902 C8orf76Q96K31 380 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 TARS2Q9BW92 718 aaKnown RBP20.76■□□□□ 0.91
SCARF1-204ENST00000570902 RAB34Q9BZG1 259 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 PARD6AQ9NPB6 346 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 KMT5AQ9NQR1 393 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 DDX19AQ9NUU7 478 aaKnown RBP20.76■□□□□ 0.91
SCARF1-204ENST00000570902 ARHGAP28Q9P2N2 729 aa20.76■□□□□ 0.91
SCARF1-204ENST00000570902 COL4A2P08572 1712 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 MYL4P12829 197 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 CPB1P15086 417 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 PROZP22891 400 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 MARCKSP29966 332 aaPredicted RBP20.75■□□□□ 0.91
SCARF1-204ENST00000570902 CXCL12P48061 93 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 TRAPPC10P48553 1259 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 PDIA5Q14554 519 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 MFSD6LQ8IWD5 586 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 HS6ST3Q8IZP7 471 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 DDX12PQ92771 950 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 C18orf25Q96B23 403 aaPredicted RBP20.75■□□□□ 0.91
SCARF1-204ENST00000570902 TBC1D32Q96NH3 1257 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 C17orf75Q9HAS0 396 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 CEP72Q9P209 647 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 PCDHB8Q9UN66 801 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 DNM3Q9UQ16 869 aa20.75■□□□□ 0.91
SCARF1-204ENST00000570902 DCDC2BA2VCK2 349 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 MOSPD3O75425 235 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 RETP07949 1114 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 VIPR2P41587 438 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 NEK4P51957 841 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 SPEM2Q0P670 501 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 PLD1Q13393 1074 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 GNL2Q13823 731 aaKnown RBP20.74■□□□□ 0.91
SCARF1-204ENST00000570902 LRRC32Q14392 662 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 PRR23BQ6ZRT6 265 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 YAF2Q8IY57 180 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 NETO1Q8TDF5 533 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 CSGALNACT1Q8TDX6 532 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 SNX29Q8TEQ0 813 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 OXCT2Q9BYC2 517 aaPredicted RBP20.74■□□□□ 0.91
SCARF1-204ENST00000570902 SLITRK6Q9H5Y7 841 aa20.74■□□□□ 0.91
SCARF1-204ENST00000570902 NOL7Q9UMY1 257 aaKnown RBP20.74■□□□□ 0.91
SCARF1-204ENST00000570902 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.74■□□□□ 0.91
SCARF1-204ENST00000570902 TICRRQ7Z2Z1 1910 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 HEPACAM2A8MVW5 462 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 NRG2O14511 850 aaPredicted RBP20.73■□□□□ 0.91
SCARF1-204ENST00000570902 ABLIM1O14639 778 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 HIP1RO75146 1068 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 CHRNB1P11230 501 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 CCNE1P24864 410 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 STRN3Q13033 797 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 LPAL2Q16609 132 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 TAS1R3Q7RTX0 852 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 DAW1Q8N136 415 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 SPEM1Q8N4L4 309 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 KCNG1Q9UIX4 513 aa20.73■□□□□ 0.91
SCARF1-204ENST00000570902 ARNTLO00327 626 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 TOM1L1O75674 476 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms