RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 HADHQ16836 314 aaKnown RBP6.44□□□□□ -1.38
CYLD-216ENST00000569891 PHLDB3Q6NSJ2 640 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 DLK2Q6UY11 383 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 TRIM50Q86XT4 487 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 MMGT1Q8N4V1 131 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 USP38Q8NB14 1042 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 RBBP8NLQ8NC74 664 aaPredicted RBP6.44□□□□□ -1.38
CYLD-216ENST00000569891 TPCN2Q8NHX9 752 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 GRK7Q8WTQ7 553 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 COPS5Q92905 334 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 PGBD4Q96DM1 585 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 FDXACB1Q9BRP7 624 aaPredicted RBP6.44□□□□□ -1.38
CYLD-216ENST00000569891 SLITRK6Q9H5Y7 841 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 PARVAQ9NVD7 372 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 REXO2Q9Y3B8 237 aaKnown RBP6.44□□□□□ -1.38
CYLD-216ENST00000569891 GPR182O15218 404 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 CEP104O60308 925 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 TOMM70O94826 608 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 ASS1P00966 412 aaKnown RBP6.44□□□□□ -1.38
CYLD-216ENST00000569891 PLEKP08567 350 aaPredicted RBP6.44□□□□□ -1.38
CYLD-216ENST00000569891 STAG3L1P0CL83 205 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 SMIM10L2AP0DMW4 78 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 SMIM10L2BP0DMW5 78 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 ABCB4P21439 1286 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 PSMC4P43686 418 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 APBA1Q02410 837 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 ZFYVE27Q5T4F4 411 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 TMEM270Q6UE05 265 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 RSPH1Q8WYR4 309 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 IP6K2Q9UHH9 426 aa6.44□□□□□ -1.38
CYLD-216ENST00000569891 MTA2O94776 668 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 C6orf222P0C671 652 aaPredicted RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 SETSIPP0DME0 302 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 CD19P15391 556 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 SP3Q02447 781 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ERCC6LQ2NKX8 1250 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 MEI1Q5TIA1 1274 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 DCUN1D2Q6PH85 259 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 EIF1ADQ8N9N8 165 aaKnown RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 EPS8L1Q8TE68 723 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 HNRNPLLQ8WVV9 542 aaKnown RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 CAPZA3Q96KX2 299 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 LACRTQ9GZZ8 138 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 FAM49AQ9H0Q0 323 aaPredicted RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 CDT1Q9H211 546 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 CNOT8Q9UFF9 292 aaKnown RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 ADGRA3Q8IWK6 1321 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 DDX3XO00571 662 aaKnown RBP eCLIP6.43□□□□□ -1.381e-6■■■■■ 29.1
CYLD-216ENST00000569891 SEPT4O43236 478 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ZNF286BP0CG31 522 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 SOX10P56693 466 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 CLEC16AQ2KHT3 1053 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 DEFB115Q30KQ5 88 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 SV2CQ496J9 727 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 GNASQ5JWF2 1037 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 SLC39A4Q6P5W5 647 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 C15orf39Q6ZRI6 1047 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 LRRC52Q8N7C0 313 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ZNF564Q8TBZ8 553 aaPredicted RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 ACTRT1Q8TDG2 376 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.43□□□□□ -1.38
CYLD-216ENST00000569891 C16orf70Q9BSU1 422 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ADAM22Q9P0K1 906 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ARID2Q68CP9 1835 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ADGRA2Q96PE1 1338 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ATP1A1P05023 1023 aaKnown RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 PROZP22891 400 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 EIF4BP23588 611 aaKnown RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 RWDD2BP57060 319 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 DLG4P78352 724 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 FAM47CQ5HY64 1035 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 TAF3Q5VWG9 929 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ARHGEF19Q8IW93 802 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 ARRDC4Q8NCT1 418 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 BBOF1Q8ND07 529 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 LMO3Q8TAP4 145 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 SLC35G2Q8TBE7 412 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 CCHCR1Q8TD31 782 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 HELQQ8TDG4 1101 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 TSC1Q92574 1164 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 LRRC45Q96CN5 670 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 KIF12Q96FN5 646 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 FERMT1Q9BQL6 677 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 OGFRQ9NZT2 677 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 UTP11Q9Y3A2 253 aaKnown RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 TRPV2Q9Y5S1 764 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 GOLGA6L10A6NI86 522 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 VDRP11473 427 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 CYP3A5P20815 502 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 GJA9P57773 515 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 CUL1Q13616 776 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 CST9Q5W186 159 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 DNAJC24Q6P3W2 148 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 RSRC2Q7L4I2 434 aaKnown RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 ZNF572Q7Z3I7 529 aaPredicted RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 ERICH1Q86X53 443 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 KRT222Q8N1A0 295 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 SLC30A5Q8TAD4 765 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 NPLOC4Q8TAT6 608 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 RAET1EQ8TD07 263 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms