RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 CASTOR2A6NHX0 329 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 TBKBP1A7MCY6 615 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 B4GALT3O60512 393 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 STAU1O95793 577 aaKnown RBP13.45□□□□□ -0.26
EDC3-217ENST00000569606 GYPCP04921 128 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 TRIM21P19474 475 aaKnown RBP13.45□□□□□ -0.26
EDC3-217ENST00000569606 ATICP31939 592 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 RPL9P32969 192 aaKnown RBP13.45□□□□□ -0.26
EDC3-217ENST00000569606 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
EDC3-217ENST00000569606 LRMPQ12912 555 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 TBX2Q13207 712 aaPredicted RBP13.45□□□□□ -0.26
EDC3-217ENST00000569606 ZNF699Q32M78 642 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 FIGNQ5HY92 759 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 WDR44Q5JSH3 913 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 RASIP1Q5U651 963 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 SPOPLQ6IQ16 392 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 PHLDB3Q6NSJ2 640 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 GJB7Q6PEY0 223 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 ZNF280BQ86YH2 543 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 ARHGEF19Q8IW93 802 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 COLGALT2Q8IYK4 626 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 LRRC52Q8N7C0 313 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 TAF4BQ92750 862 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 TATDN2Q93075 761 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 NT5C1BQ96P26 610 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 PAAF1Q9BRP4 392 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 MRPL9Q9BYD2 267 aaKnown RBP13.45□□□□□ -0.26
EDC3-217ENST00000569606 IMPG2Q9BZV3 1241 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 VRTNQ9H8Y1 702 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 APOBEC3GQ9HC16 384 aaKnown RBP13.45□□□□□ -0.26
EDC3-217ENST00000569606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.45□□□□□ -0.26
EDC3-217ENST00000569606 APEX2Q9UBZ4 518 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 NUB1Q9Y5A7 615 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.26
EDC3-217ENST00000569606 FHOD1Q9Y613 1164 aa13.45□□□□□ -0.26
EDC3-217ENST00000569606 KIAA1671Q9BY89 1806 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 RNF225M0QZC1 329 aaPredicted RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 UCHL3P15374 230 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 IGFBP6P24592 240 aaPredicted RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 RGS19P49795 217 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 CLCNKBP51801 687 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 RNASELQ05823 741 aaKnown RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 TRIM14Q14142 442 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 PAN2Q504Q3 1202 aaKnown RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 IQCEQ6IPM2 695 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 FAM117BQ6P1L5 589 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 DRC7Q8IY82 874 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 LRRC43Q8N309 656 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 SPC24Q8NBT2 197 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 CCDC150Q8NCX0 1101 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 IQCDQ96DY2 449 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 DDX27Q96GQ7 796 aaKnown RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 HPDLQ96IR7 371 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 UROC1Q96N76 676 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 SLC9A7Q96T83 725 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 NAA15Q9BXJ9 866 aaKnown RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 MTIF3Q9H2K0 278 aaKnown RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 NRDE2Q9H7Z3 1164 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 HCSTQ9UBK5 93 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 FBXL5Q9UKA1 691 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 AJAP1Q9UKB5 411 aaPredicted RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 R3HCC1Q9Y3T6 440 aaKnown RBP13.44□□□□□ -0.26
EDC3-217ENST00000569606 SLC4A7Q9Y6M7 1214 aa13.44□□□□□ -0.26
EDC3-217ENST00000569606 A0A1W2PQJ5 194 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 PODXLO00592 558 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 SPTLC1O15269 473 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 GJB5O95377 273 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 PNPLA4P41247 253 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 FXR1P51114 621 aaKnown RBP eCLIP13.43□□□□□ -0.26
EDC3-217ENST00000569606 POLR2FP61218 127 aaKnown RBP13.43□□□□□ -0.26
EDC3-217ENST00000569606 HTRA4P83105 476 aaPredicted RBP13.43□□□□□ -0.26
EDC3-217ENST00000569606 MYO1EQ12965 1108 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 UPP1Q16831 310 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 C9orf50Q5SZB4 431 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 RRAGAQ7L523 313 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 CMTR2Q8IYT2 770 aaKnown RBP13.43□□□□□ -0.26
EDC3-217ENST00000569606 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 PHOSPHO2Q8TCD6 241 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 RABGGTAQ92696 567 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 KAT5Q92993 513 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 ZNF560Q96MR9 790 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 KREMEN1Q96MU8 473 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 FAM193BQ96PV7 902 aaPredicted RBP13.43□□□□□ -0.26
EDC3-217ENST00000569606 EDEM3Q9BZQ6 932 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 NLRC4Q9NPP4 1024 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 CEP72Q9P209 647 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 DNAJC12Q9UKB3 198 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 CAPN11Q9UMQ6 739 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 DAAM1Q9Y4D1 1078 aa13.43□□□□□ -0.26
EDC3-217ENST00000569606 RFX1P22670 979 aa13.42□□□□□ -0.26
EDC3-217ENST00000569606 CASP14P31944 242 aa13.42□□□□□ -0.26
EDC3-217ENST00000569606 TAF6P49848 677 aa13.42□□□□□ -0.26
EDC3-217ENST00000569606 GCNT1Q02742 428 aa13.42□□□□□ -0.26
EDC3-217ENST00000569606 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
EDC3-217ENST00000569606 CUL2Q13617 745 aa13.42□□□□□ -0.26
EDC3-217ENST00000569606 SHHQ15465 462 aa13.42□□□□□ -0.26
EDC3-217ENST00000569606 WDR72Q3MJ13 1102 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms