RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 PANK2Q9BZ23 570 aa10.07□□□□□ -0.8
CAPN3-219ENST00000569136 CUEDC2Q9H467 287 aa10.07□□□□□ -0.8
CAPN3-219ENST00000569136 PARP2Q9UGN5 583 aa10.07□□□□□ -0.8
CAPN3-219ENST00000569136 ATXN7L1Q9ULK2 861 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-219ENST00000569136 INPP5FQ9Y2H2 1132 aa10.07□□□□□ -0.8
CAPN3-219ENST00000569136 FAN1Q9Y2M0 1017 aa10.07□□□□□ -0.8
CAPN3-219ENST00000569136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-219ENST00000569136 RBAK-RBAKDNI3L0D1 243 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 SLC16A4O15374 487 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 TOM1L1O75674 476 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 NPTXRO95502 500 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 MAPTP10636 758 aaKnown RBP10.06□□□□□ -0.8
CAPN3-219ENST00000569136 GAP43P17677 238 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 MX2P20592 715 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 FGFR3P22607 806 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 STAT6P42226 847 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 ME1P48163 572 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 NUCB2P80303 420 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 RAD51AP2Q09MP3 1159 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 ZNF211Q13398 564 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-219ENST00000569136 MTMR3Q13615 1198 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 CAMK1Q14012 370 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 UBAP2LQ14157 1087 aaKnown RBP10.06□□□□□ -0.8
CAPN3-219ENST00000569136 DHX8Q14562 1220 aaKnown RBP10.06□□□□□ -0.8
CAPN3-219ENST00000569136 KYAT1Q16773 422 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 LONRF3Q496Y0 759 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 ZPBP2Q6X784 338 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 HAUS6Q7Z4H7 955 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 HOMEZQ8IX15 550 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 SLC39A11Q8N1S5 342 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 IGSF21Q96ID5 467 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 GAD1Q99259 594 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 KIFC3Q9BVG8 833 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 COLEC11Q9BWP8 271 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 SCAND2PQ9GZW5 306 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-219ENST00000569136 PDZD7Q9H5P4 517 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 NRDE2Q9H7Z3 1164 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 PTPRHQ9HD43 1115 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 BRD7Q9NPI1 651 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 TLR9Q9NR96 1032 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 THEGQ9P2T0 379 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 SEL1LQ9UBV2 794 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-219ENST00000569136 MYO7AQ13402 2215 aa10.06□□□□□ -0.8
CAPN3-219ENST00000569136 TANC1Q9C0D5 1861 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 MEIS3P2A8K0S8 358 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 ZC3H11AO75152 810 aaKnown RBP eCLIP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 CXCL14O95715 111 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 MCF2P10911 925 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 CD33P20138 364 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 IDH3AP50213 366 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 YARSP54577 528 aaKnown RBP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 KRT85P78386 507 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 DNM1Q05193 864 aaKnown RBP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TNP2Q05952 138 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 COL19A1Q14993 1142 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TCEAL5Q5H9L2 206 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 RNFT1Q5M7Z0 435 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 AXDND1Q5T1B0 1012 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TMC7Q7Z402 723 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 ZNF280BQ86YH2 543 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TREML1Q86YW5 311 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 FAM178BQ8IXR5 827 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 MRPL43Q8N983 215 aaKnown RBP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TMEM87AQ8NBN3 555 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 PABPC5Q96DU9 382 aaKnown RBP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 ACAP3Q96P50 834 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 ASB2Q96Q27 587 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TSPAN18Q96SJ8 248 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 REEP2Q9BRK0 252 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 CCDC94Q9BW85 323 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TARS2Q9BW92 718 aaKnown RBP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 ST6GALNAC4Q9H4F1 302 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TLE6Q9H808 572 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 MAGEF1Q9HAY2 307 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TOPORSQ9NS56 1045 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-219ENST00000569136 STIM2Q9P246 746 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 TBX20Q9UMR3 447 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 PCDHA7Q9UN72 937 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 FAM50BQ9Y247 325 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 HES2Q9Y543 173 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 CUL9Q8IWT3 2517 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 COL4A6Q14031 1691 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 NCOR1O75376 2440 aa10.05□□□□□ -0.8
CAPN3-219ENST00000569136 MICAL3Q7RTP6 2002 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 CDH23Q9H251 3354 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 NPHP3-ACAD11A0A0J9YXS1 232 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 FSCN2O14926 492 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 CLDN3O15551 220 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 MICAL2O94851 1124 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 POMCP01189 267 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 THP07101 528 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 PROZP22891 400 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 CMA1P23946 247 aa10.04□□□□□ -0.8
CAPN3-219ENST00000569136 AKAP5P24588 427 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms