RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	KIAA0391	O15091	583 aa	Known RBP	11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	RFPL2	O75678	378 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	HOXA9	P31269	272 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	YWHAH	Q04917	246 aa	Predicted RBP	11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	DNM1	Q05193	864 aa	Known RBP	11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	SPAG1	Q07617	926 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	SIGLEC14	Q08ET2	396 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	VARS2	Q5ST30	1063 aa	Known RBP	11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	ARMCX5	Q6P1M9	558 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	LILRA6	Q6PI73	481 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	TRIM67	Q6ZTA4	783 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	METTL23	Q86XA0	190 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	NT5DC4	Q86YG4	428 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	ZNF461	Q8TAF7	563 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	CCDC47	Q96A33	483 aa	Known RBP	11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	SUSD3	Q96L08	255 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	IGSF9	Q9P2J2	1179 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	FBXW11	Q9UKB1	542 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	CPSF3	Q9UKF6	684 aa	Known RBP	11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	PCDHB8	Q9UN66	801 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	PCDHA7	Q9UN72	937 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	CLUH	O75153	1309 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	ANK1	P16157	1881 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	DENND4A	Q7Z401	1863 aa		11.25	□□□□□ -0.61
UBR1-207	ENST00000568782	TMEM221	A6NGB7	291 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	ANKRD63	C9JTQ0	380 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782		M0R296	226 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	ODC1	P11926	461 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	CPB1	P15086	417 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	GART	P22102	1010 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	LRPAP1	P30533	357 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	SURF1	Q15526	300 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	ENOX2	Q16206	610 aa	Known RBP	11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	SPATA1	Q5VX52	437 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	TPGS2	Q68CL5	300 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	JADE1	Q6IE81	842 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	C3orf58	Q8NDZ4	430 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	SLC7A14	Q8TBB6	771 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	NXPE3	Q969Y0	559 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	FIZ1	Q96SL8	496 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	FAM213A	Q9BRX8	229 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	TRIM9	Q9C026	710 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	HAPLN2	Q9GZV7	340 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	MFSD1	Q9H3U5	465 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	KBTBD4	Q9NVX7	518 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	TUBGCP4	Q9UGJ1	667 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	CDH22	Q9UJ99	828 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	RCOR1	Q9UKL0	485 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	DSE	Q9UL01	958 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	KCNH3	Q9ULD8	1083 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	MAFF	Q9ULX9	164 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	C2CD2	Q9Y426	696 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	STYXL1	Q9Y6J8	313 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782	MUC3A	Q02505	3323 aa		11.24	□□□□□ -0.61
UBR1-207	ENST00000568782		A0A087X0B3	334 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	FRMD3	A2A2Y4	597 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	CCL16	O15467	120 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	PRPF6	O94906	941 aa	Known RBP	11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	ATF2	P15336	505 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	RFX1	P22670	979 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	FSHR	P23945	695 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	PNPLA4	P41247	253 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	AFM	P43652	599 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	TDG	Q13569	410 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	ZBTB6	Q15916	424 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	IQCE	Q6IPM2	695 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	SLC8B1	Q6J4K2	584 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	SHC4	Q6S5L8	630 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	GET4	Q7L5D6	327 aa	Predicted RBP	11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	HS2ST1	Q7LGA3	356 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	THEM5	Q8N1Q8	247 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	ZNF560	Q96MR9	790 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	C7orf25	Q9BPX7	421 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	CYP4F11	Q9HBI6	524 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	KIAA1586	Q9HCI6	787 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	DPP3	Q9NY33	737 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	USP25	Q9UHP3	1055 aa		11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	SPTBN5	Q9NRC6	3674 aa	Known RBP	11.23	□□□□□ -0.61
UBR1-207	ENST00000568782	PVALEF	A0A1B0GWK0	134 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	GOLGA6L4	A6NEF3	574 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	OR6C75	A6NL08	312 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782		M0QZQ0	153 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	EIF3D	O15371	548 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	EXTL3	O43909	919 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	PPP1R37	O75864	691 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	ADRB2	P07550	413 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	TMEM191B	P0C7N4	346 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	PTPN2	P17706	415 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	TAF6	P49848	677 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	LILRA4	P59901	499 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	SNRPF	P62306	86 aa	Known RBP	11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	TFAM	Q00059	246 aa	Known RBP	11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	ROR1	Q01973	937 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	PLD1	Q13393	1074 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	PKP1	Q13835	747 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	E2F4	Q16254	413 aa		11.22	□□□□□ -0.61
UBR1-207	ENST00000568782	SV2C	Q496J9	727 aa		11.22	□□□□□ -0.61

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