RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 HS6ST3Q8IZP7 471 aa16.97■□□□□ 0.31
NME3-211ENST00000568561 AVENQ9NQS1 362 aaPredicted RBP16.97■□□□□ 0.31
NME3-211ENST00000568561 MED19A0JLT2 244 aaPredicted RBP16.96■□□□□ 0.31
NME3-211ENST00000568561 H7C4K7 107 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 CXCL8P10145 99 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 GJA1P17302 382 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 MRPL58Q14197 206 aaKnown RBP16.96■□□□□ 0.31
NME3-211ENST00000568561 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.31
NME3-211ENST00000568561 SLC10A6Q3KNW5 377 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 ZNF280DQ6N043 979 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 PDZD4Q76G19 769 aaPredicted RBP16.96■□□□□ 0.31
NME3-211ENST00000568561 ELSPBP1Q96BH3 223 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 SUSD3Q96L08 255 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 ZSCAN31Q96LW9 406 aaPredicted RBP16.96■□□□□ 0.31
NME3-211ENST00000568561 ZSWIM3Q96MP5 696 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 TBC1D32Q96NH3 1257 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 PNMA5Q96PV4 448 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 OSBPL6Q9BZF3 934 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 CEP72Q9P209 647 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 FBXO4Q9UKT5 387 aa16.96■□□□□ 0.31
NME3-211ENST00000568561 NDRG2Q9UN36 371 aaKnown RBP16.96■□□□□ 0.31
NME3-211ENST00000568561 RBM19Q9Y4C8 960 aaKnown RBP16.96■□□□□ 0.31
NME3-211ENST00000568561 NCANO14594 1321 aa16.96■□□□□ 0.3
NME3-211ENST00000568561 NPHP3-ACAD11A0A0J9YXS1 232 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 MYL4P12829 197 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 CPB1P15086 417 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 RPL9P32969 192 aaKnown RBP16.95■□□□□ 0.3
NME3-211ENST00000568561 ADCY1Q08828 1119 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 TWF1Q12792 350 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 STRN3Q13033 797 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 ZNF528Q3MIS6 628 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 ZNF852Q6ZMS4 543 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 TMEM161BQ8NDZ6 487 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 DDX12PQ92771 950 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 CLDN23Q96B33 292 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 KIF2CQ99661 725 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 HAPLN2Q9GZV7 340 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 BRD9Q9H8M2 597 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.95■□□□□ 0.3
NME3-211ENST00000568561 SH2B1Q9NRF2 756 aaPredicted RBP16.95■□□□□ 0.3
NME3-211ENST00000568561 TIMM13Q9Y5L4 95 aaPredicted RBP16.95■□□□□ 0.3
NME3-211ENST00000568561 STK24Q9Y6E0 443 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 TSC2P49815 1807 aa16.95■□□□□ 0.3
NME3-211ENST00000568561 MOSPD3O75425 235 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 TOM1L1O75674 476 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 OR4Q2P0C623 313 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 MAPTP10636 758 aaKnown RBP16.94■□□□□ 0.3
NME3-211ENST00000568561 GUCY2CP25092 1073 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 VIPR2P41587 438 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 MATR3P43243 847 aaKnown RBP eCLIP16.94■□□□□ 0.3
NME3-211ENST00000568561 GUCY2FP51841 1108 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 TPGS2Q68CL5 300 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 MCTP1Q6DN14 999 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 RNF19BQ6ZMZ0 732 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 DGLUCYQ7Z3D6 616 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 ASB16Q96NS5 453 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 PGLYRP2Q96PD5 576 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 ZFP14Q9HCL3 533 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 NCDNQ9UBB6 729 aa16.94■□□□□ 0.3
NME3-211ENST00000568561 AFF4Q9UHB7 1163 aaKnown RBP16.94■□□□□ 0.3
NME3-211ENST00000568561 LAD1O00515 517 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 SPTLC1O15269 473 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 EIF5BO60841 1220 aaKnown RBP16.93■□□□□ 0.3
NME3-211ENST00000568561 VNN2O95498 520 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 PLS3P13797 630 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 GDI1P31150 447 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 PRPHP41219 470 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 TNFSF9P41273 254 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 MAGEA9P43362 315 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 MTAPQ13126 283 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 FZD5Q13467 585 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 CYP4A22Q5TCH4 519 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 VITQ6UXI7 678 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 ELMOD1Q8N336 334 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 SPIRE2Q8WWL2 714 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 ATRIPQ8WXE1 791 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 DNASE1L2Q92874 299 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 TRMT61BQ9BVS5 477 aaKnown RBP16.93■□□□□ 0.3
NME3-211ENST00000568561 C17orf75Q9HAS0 396 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 PCDHB8Q9UN66 801 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 YIPF1Q9Y548 306 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 PCDHGA2Q9Y5H1 932 aa16.93■□□□□ 0.3
NME3-211ENST00000568561 VWA3AA6NCI4 1184 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 ZNF197O14709 1029 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 TEAD2Q15562 447 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 IQCEQ6IPM2 695 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 ZBTB44Q8NCP5 570 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 APPL2Q8NEU8 664 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 SHKBP1Q8TBC3 707 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 ZSCAN18Q8TBC5 510 aaPredicted RBP16.92■□□□□ 0.3
NME3-211ENST00000568561 SMARCD2Q92925 531 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 KIF12Q96FN5 646 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 BICD1Q96G01 975 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 ZNF512Q96ME7 567 aaPredicted RBP16.92■□□□□ 0.3
NME3-211ENST00000568561 NELL2Q99435 816 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 CRISPLD1Q9H336 500 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 PRMT8Q9NR22 394 aaPredicted RBP16.92■□□□□ 0.3
NME3-211ENST00000568561 ASAH2Q9NR71 780 aa16.92■□□□□ 0.3
NME3-211ENST00000568561 ZSCAN32Q9NX65 697 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms