RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 ZDHHC7Q9NXF8 308 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 DDX56Q9NY93 547 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 SNTG2Q9NY99 539 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 GDAQ9Y2T3 454 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 RBM19Q9Y4C8 960 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 ZFP37Q9Y6Q3 630 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 ZDBF2Q9HCK1 2354 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 DOCK8Q8NF50 2099 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 CASTOR2A6NHX0 329 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 H0YCG3 227 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 TGM5O43548 720 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 XYLBO75191 536 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 PEX14O75381 377 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 RECQL4O94761 1208 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 B3GAT3O94766 335 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 HNRNPA1P09651 372 aaKnown RBP eCLIP5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 MYBP10242 640 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 U2AF2P26368 475 aaKnown RBP eCLIP5.11□□□□□ -1.594e-10■■□□□ 14.2
HERPUD1-213ENST00000568358 ELF1P32519 619 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 PRPHP41219 470 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 MATR3P43243 847 aaKnown RBP eCLIP5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 MCM2P49736 904 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 PEX3P56589 373 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 EHHADHQ08426 723 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 RABEP1Q15276 862 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 PSMD5Q16401 504 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 UVSSAQ2YD98 709 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 RILPL1Q5EBL4 403 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 PPM1LQ5SGD2 360 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 ATF7IP2Q5U623 682 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 DCLRE1AQ6PJP8 1040 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 RTL10Q7L3V2 364 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 RETREG3Q86VR2 466 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 FLCNQ8NFG4 579 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 HASPINQ8TF76 798 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 TSC1Q92574 1164 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 RABGGTAQ92696 567 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 DMRTB1Q96MA1 342 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 ACAP3Q96P50 834 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 RTP3Q9BQQ7 232 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 OCSTAMPQ9BR26 566 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 MRPL4Q9BYD3 311 aaKnown RBP5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 RHOBTB2Q9BYZ6 727 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 GPR62Q9BZJ7 368 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 NT5C3AQ9H0P0 336 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 PDZD7Q9H5P4 517 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 C17orf75Q9HAS0 396 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 KCNK12Q9HB15 430 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 KMT5AQ9NQR1 393 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 GEMIN8Q9NWZ8 242 aaKnown RBP5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 MARCH5Q9NX47 278 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 CDH22Q9UJ99 828 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 POLIQ9UNA4 740 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 DENND4AQ7Z401 1863 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 KMT2EQ8IZD2 1858 aa5.11□□□□□ -1.59
HERPUD1-213ENST00000568358 H0Y858 1186 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 H7C4K7 107 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 WNT7AO00755 349 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 B4GALT3O60512 393 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 DNAJC6O75061 913 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 HIP1RO75146 1068 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 CLUHO75153 1309 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 RFPL2O75678 378 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 LAMP2P13473 410 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 RPL17P18621 184 aaKnown RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 FSHRP23945 695 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 MARCKSP29966 332 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 NPTX2P47972 431 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 VCPP55072 806 aaKnown RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 OSTNP61366 133 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 LAPTM4AQ15012 233 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 ZNF568Q3ZCX4 644 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 AXDND1Q5T1B0 1012 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 PRSS55Q6UWB4 352 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 CAPN12Q6ZSI9 719 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 ANKS3Q6ZW76 656 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 RNF168Q8IYW5 571 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 ELMOD1Q8N336 334 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 IGSF22Q8N9C0 903 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 GSTCDQ8NEC7 633 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 PRSS33Q8NF86 280 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 RASSF8Q8NHQ8 419 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 BSNDQ8WZ55 320 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 BICD1Q96G01 975 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 CALML4Q96GE6 196 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 SHDQ96IW2 340 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 B3GALT6Q96L58 329 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 POLD4Q9HCU8 107 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 KCND2Q9NZV8 630 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 LARSQ9P2J5 1176 aaKnown RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 EPS15L1Q9UBC2 864 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 WNT16Q9UBV4 365 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 DUSP12Q9UNI6 340 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 SMC3Q9UQE7 1217 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 TNFSF13BQ9Y275 285 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 NUB1Q9Y5A7 615 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 PCDHB6Q9Y5E3 794 aa5.1□□□□□ -1.59
HERPUD1-213ENST00000568358 VWA8A3KMH1 1905 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms