RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NBPF20Q3BBV1 942 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 SLC10A6Q3KNW5 377 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 PEX26Q7Z412 305 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 PHLDB2Q86SQ0 1253 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 RBBP8NLQ8NC74 664 aaPredicted RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 TPCN2Q8NHX9 752 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 OLIG1Q8TAK6 271 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 RAET1EQ8TD07 263 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 CPA5Q8WXQ8 436 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 TAF4BQ92750 862 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 KIF12Q96FN5 646 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 MMS19Q96T76 1030 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 RHOXF2Q9BQY4 288 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 MTG1Q9BT17 334 aaPredicted RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 TLR10Q9BXR5 811 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 EIF2AQ9BY44 585 aaKnown RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 SNTG2Q9NY99 539 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 SMARCAL1Q9NZC9 954 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 EHD2Q9NZN4 543 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 INTUQ9ULD6 942 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 PCDHGC5Q9Y5F6 944 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 TCP1P17987 556 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 BPIFB4P59827 614 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 GPC5P78333 572 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 CKAP4Q07065 602 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 NFX1Q12986 1120 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 TMEM132DQ14C87 1099 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 SNX17Q15036 470 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 RPS6KA1Q15418 735 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 C2CD6Q53TS8 623 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 NOTUMQ6P988 496 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 C1orf127Q8N9H9 656 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 RFFLQ8WZ73 363 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 ZNF653Q96CK0 615 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 NIF3L1Q9GZT8 377 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 CREBZFQ9NS37 354 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 NENFQ9UMX5 172 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 MROH7Q68CQ1 1323 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 BTNL10A8MVZ5 291 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 M0QZ92 97 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 KCNK3O14649 394 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 IGHA2P01877 340 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 ASGR1P07306 291 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 AKAP5P24588 427 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 POLR2BP30876 1174 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 HOXA11P31270 313 aaPredicted RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 PAFAH1B1P43034 410 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 RAP1GAPP47736 663 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 YARSP54577 528 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 GJA9P57773 515 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 ZNF667Q5HYK9 610 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 GLRA4Q5JXX5 417 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 NAA35Q5VZE5 725 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 SLC27A1Q6PCB7 646 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 APBB1IPQ7Z5R6 666 aaPredicted RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 PDCL2Q8N4E4 241 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 MS4A14Q96JA4 679 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 ASB7Q9H672 318 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 CISHQ9NSE2 258 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 POLIQ9UNA4 740 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 AGAP1Q9UPQ3 857 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 ANK1P16157 1881 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 PDE2AO00408 941 aaPredicted RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 BUB1BO60566 1050 aaPredicted RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 KPNA6O60684 536 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 ACO1P21399 889 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 HOXD10P28358 340 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 APLP1P51693 650 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 CDH8P55286 799 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 ADAM17P78536 824 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 KCNA10Q16322 511 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 MEI1Q5TIA1 1274 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 TWF2Q6IBS0 349 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 DPH6Q7L8W6 267 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 SYCE1Q8N0S2 351 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 NOA1Q8NC60 698 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 DDX1Q92499 740 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 ANKRD7Q92527 254 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 CYFIP2Q96F07 1278 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 PKNOX2Q96KN3 472 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 ISCUQ9H1K1 167 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 NXF3Q9H4D5 531 aaKnown RBP7.56□□□□□ -1.2
SMG1-215ENST00000568239 KLK14Q9P0G3 267 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 PARP2Q9UGN5 583 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 TSKSQ9UJT2 592 aa7.56□□□□□ -1.2
SMG1-215ENST00000568239 A0A0A6YYK5 440 aaPredicted RBP7.55□□□□□ -1.2
SMG1-215ENST00000568239 MEFVO15553 781 aaPredicted RBP7.55□□□□□ -1.2
SMG1-215ENST00000568239 CFHP08603 1231 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 GZMAP12544 262 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 CD19P15391 556 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 NSFP46459 744 aaKnown RBP7.55□□□□□ -1.2
SMG1-215ENST00000568239 C2orf54Q08AI8 447 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 ORC1Q13415 861 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 MESDQ14696 234 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 KYAT1Q16773 422 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 DCAF4L1Q3SXM0 396 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 GDF6Q6KF10 455 aaPredicted RBP7.55□□□□□ -1.2
SMG1-215ENST00000568239 TAF2Q6P1X5 1199 aa7.55□□□□□ -1.2
SMG1-215ENST00000568239 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
SMG1-215ENST00000568239 RHOT2Q8IXI1 618 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms