RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 SPAG1Q07617 926 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 CTXN3Q4LDR2 81 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 ZNF280DQ6N043 979 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 TCEAL8Q8IYN2 117 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 DTWD2Q8NBA8 298 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 APPL2Q8NEU8 664 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 LARP4BQ92615 738 aaKnown RBP16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 CCSER1Q9C0I3 900 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 TBC1D17Q9HA65 648 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 UBQLN1Q9UMX0 589 aaKnown RBP16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 PCDHB8Q9UN66 801 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 PATJQ8NI35 1801 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 COL4A3Q01955 1670 aa16.4■□□□□ 0.22
SCAMP2-209ENST00000567638 OGTO15294 1046 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 RHOP08100 348 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 CYP3A5P20815 502 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 PTPAQ15257 358 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 ZBTB6Q15916 424 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 SLC5A9Q2M3M2 681 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 ZBTB41Q5SVQ8 909 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 TPGS2Q68CL5 300 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 PHLDB3Q6NSJ2 640 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 TMEM130Q8N3G9 435 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 ING5Q8WYH8 240 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 FIZ1Q96SL8 496 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 ZHX3Q9H4I2 956 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 CYP4F11Q9HBI6 524 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 AVENQ9NQS1 362 aaPredicted RBP16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 MRPS23Q9Y3D9 190 aaKnown RBP16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 INSL5Q9Y5Q6 135 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 SCN1AP35498 2009 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 FANCMQ8IYD8 2048 aa16.39■□□□□ 0.21
SCAMP2-209ENST00000567638 A0A0B4J269 797 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 LACTBL1A8MY62 500 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 M0QZQ0 153 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 XPOTO43592 962 aaKnown RBP16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 SEC24AO95486 1093 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 PTPN2P17706 415 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 NMT1P30419 496 aaKnown RBP16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 ABCD1P33897 745 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 GPC5P78333 572 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 ENOX2Q16206 610 aaKnown RBP16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 SLC39A4Q6P5W5 647 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 USP49Q70CQ1 688 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 MAP4K3Q8IVH8 894 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 TSPAN18Q96SJ8 248 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 KXD1Q9BQD3 176 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 MSTO1Q9BUK6 570 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 RPF1Q9H9Y2 349 aaKnown RBP16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 AFF4Q9UHB7 1163 aaKnown RBP16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 CLIC4Q9Y696 253 aa16.38■□□□□ 0.21
SCAMP2-209ENST00000567638 COL4A2P08572 1712 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 ADRB2P07550 413 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 CPB1P15086 417 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 MARCKSP29966 332 aaPredicted RBP16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 DDIT3P35638 169 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 AARSP49588 968 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 GTF2BQ00403 316 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 YWHAHQ04917 246 aaPredicted RBP16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 RESTQ13127 1097 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 ANGPT1Q15389 498 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 EPSTI1Q96J88 318 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 CORO1BQ9BR76 489 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 GDE1Q9NZC3 331 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 STK17AQ9UEE5 414 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 FBXO2Q9UK22 296 aaPredicted RBP16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 CPSF3Q9UKF6 684 aaKnown RBP16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 MAFFQ9ULX9 164 aa16.37■□□□□ 0.21
SCAMP2-209ENST00000567638 OAZ2O95190 189 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 CEBPBP17676 345 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 SYT1P21579 422 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 GUCY2FP51841 1108 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 STARD6P59095 220 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 ADCY1Q08828 1119 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 ZC2HC1CQ53FD0 456 aaPredicted RBP16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 PRSS36Q5K4E3 855 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 SPECC1Q5M775 1068 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 SPATA1Q5VX52 437 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 CD302Q8IX05 232 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 KRI1Q8N9T8 703 aaKnown RBP16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 MCRS1Q96EZ8 462 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 ST6GALNAC4Q9H4F1 302 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 CCDC39Q9UFE4 941 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 SIT1Q9Y3P8 196 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 SRPRBQ9Y5M8 271 aaKnown RBP16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 TICRRQ7Z2Z1 1910 aa16.36■□□□□ 0.21
SCAMP2-209ENST00000567638 NUP210Q8TEM1 1887 aaPredicted RBP16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 PRR23AA6NEV1 266 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 ANKRD63C9JTQ0 380 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 ECI2O75521 394 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 PFKPQ01813 784 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 JADE1Q6IE81 842 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 POTEHQ6S545 545 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 DSTYKQ6XUX3 929 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 RNF19BQ6ZMZ0 732 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 ASCL5Q7RTU5 278 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 FRMD5Q7Z6J6 570 aa16.35■□□□□ 0.21
SCAMP2-209ENST00000567638 ELMOD1Q8N336 334 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms