RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 BCO2Q9BYV7 579 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 FOXQ1Q9C009 403 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 ANKFY1Q9P2R3 1169 aa16.35■□□□□ 0.21
RNF40-209ENST00000566703 M0QZQ0 153 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 XPOTO43592 962 aaKnown RBP16.34■□□□□ 0.21
RNF40-209ENST00000566703 OAZ2O95190 189 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 SEC24AO95486 1093 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 SP9P0CG40 484 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 UBA7P41226 1012 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 ARPP19P56211 112 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 SLC5A9Q2M3M2 681 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 PRSS36Q5K4E3 855 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 CYP4A22Q5TCH4 519 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 IQCEQ6IPM2 695 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 ING5Q8WYH8 240 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 CALML4Q96GE6 196 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 ZNF512Q96ME7 567 aaPredicted RBP16.34■□□□□ 0.21
RNF40-209ENST00000566703 UBQLN1Q9UMX0 589 aaKnown RBP16.34■□□□□ 0.21
RNF40-209ENST00000566703 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.34■□□□□ 0.21
RNF40-209ENST00000566703 INSL5Q9Y5Q6 135 aa16.34■□□□□ 0.21
RNF40-209ENST00000566703 DOCK6Q96HP0 2047 aa16.33■□□□□ 0.21
RNF40-209ENST00000566703 FAM170BA6NMN3 283 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 NCAM2O15394 837 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 PIGRP01833 764 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 ADRB2P07550 413 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 GLULP15104 373 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 MATR3P43243 847 aaKnown RBP eCLIP16.33■□□□□ 0.2
RNF40-209ENST00000566703 AARSP49588 968 aaKnown RBP eCLIP16.33■□□□□ 0.2
RNF40-209ENST00000566703 ADCY1Q08828 1119 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 SEZ6Q53EL9 994 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 PDZD4Q76G19 769 aaPredicted RBP16.33■□□□□ 0.2
RNF40-209ENST00000566703 CD302Q8IX05 232 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 DNASE1L2Q92874 299 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 BICD1Q96G01 975 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 KXD1Q9BQD3 176 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 CORO1BQ9BR76 489 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 HAPLN2Q9GZV7 340 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 UPF2Q9HAU5 1272 aaKnown RBP16.33■□□□□ 0.2
RNF40-209ENST00000566703 ZFP14Q9HCL3 533 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 LTB4R2Q9NPC1 389 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 FBXO4Q9UKT5 387 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 SMC3Q9UQE7 1217 aa16.33■□□□□ 0.2
RNF40-209ENST00000566703 PTPRZ1P23471 2315 aaPredicted RBP16.33■□□□□ 0.2
RNF40-209ENST00000566703 NPHP3-ACAD11A0A0J9YXS1 232 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 OGTO15294 1046 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 CXCL8P10145 99 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 CEBPBP17676 345 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 LONP1P36776 959 aaKnown RBP16.32■□□□□ 0.2
RNF40-209ENST00000566703 LIG4P49917 911 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 ZNF131P52739 623 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 EPHA5P54756 1037 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 YWHAHQ04917 246 aaPredicted RBP16.32■□□□□ 0.2
RNF40-209ENST00000566703 PPP2R3AQ06190 1150 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 TRIP11Q15643 1979 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 ZNF528Q3MIS6 628 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 ZBTB41Q5SVQ8 909 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 LARP1BQ659C4 914 aaKnown RBP16.32■□□□□ 0.2
RNF40-209ENST00000566703 TANGO2Q6ICL3 276 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 BEST2Q8NFU1 509 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 KCNG4Q8TDN1 519 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 CLDN23Q96B33 292 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 KIF12Q96FN5 646 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 PLA2G2FQ9BZM2 168 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 GPR88Q9GZN0 384 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 PARVGQ9HBI0 331 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 TUBGCP4Q9UGJ1 667 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 TBX20Q9UMR3 447 aa16.32■□□□□ 0.2
RNF40-209ENST00000566703 MRPS17Q9Y2R5 130 aaKnown RBP16.32■□□□□ 0.2
RNF40-209ENST00000566703 NOTCH4Q99466 2003 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 OR6C75A6NL08 312 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 LACTBL1A8MY62 500 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 FAM13AO94988 1023 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
RNF40-209ENST00000566703 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
RNF40-209ENST00000566703 UBXN2BQ14CS0 331 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 POTEHQ6S545 545 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 ZNF852Q6ZMS4 543 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 GPBP1Q86WP2 473 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 MAML2Q8IZL2 1156 aaPredicted RBP16.31■□□□□ 0.2
RNF40-209ENST00000566703 MYCT1Q8N699 235 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 REEP2Q9BRK0 252 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 RPF1Q9H9Y2 349 aaKnown RBP16.31■□□□□ 0.2
RNF40-209ENST00000566703 TRPV5Q9NQA5 729 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 BLOC1S4Q9NUP1 217 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 R4GN57 208 aa16.31■□□□□ 0.2
RNF40-209ENST00000566703 ZFHX2Q9C0A1 2572 aaPredicted RBP16.3■□□□□ 0.2
RNF40-209ENST00000566703 A0A0B4J269 797 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 MAN2B1O00754 1011 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 LAMTOR5O43504 91 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 TRAK2O60296 914 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 FAM189A1O60320 539 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 LRRN2O75325 713 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 CPB1P15086 417 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 TYMPP19971 482 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 POU5F1Q01860 360 aaKnown RBP16.3■□□□□ 0.2
RNF40-209ENST00000566703 CACNB1Q02641 598 aaPredicted RBP16.3■□□□□ 0.2
RNF40-209ENST00000566703 TWF1Q12792 350 aa16.3■□□□□ 0.2
RNF40-209ENST00000566703 GPR17Q13304 367 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms