RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TARSP26639 723 aaKnown RBP18.04■□□□□ 0.48
TSR3-202ENST00000566296 CDC25AP30304 524 aa18.04■□□□□ 0.48
TSR3-202ENST00000566296 PRSS36Q5K4E3 855 aa18.04■□□□□ 0.48
TSR3-202ENST00000566296 CYP4A22Q5TCH4 519 aa18.04■□□□□ 0.48
TSR3-202ENST00000566296 KCNK18Q7Z418 384 aa18.04■□□□□ 0.48
TSR3-202ENST00000566296 SPIRE2Q8WWL2 714 aa18.04■□□□□ 0.48
TSR3-202ENST00000566296 C18orf25Q96B23 403 aaPredicted RBP18.04■□□□□ 0.48
TSR3-202ENST00000566296 CDK5RAP3Q96JB5 506 aa18.04■□□□□ 0.48
TSR3-202ENST00000566296 ZFP14Q9HCL3 533 aa18.04■□□□□ 0.48
TSR3-202ENST00000566296 AFF4Q9UHB7 1163 aaKnown RBP18.04■□□□□ 0.48
TSR3-202ENST00000566296 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.04■□□□□ 0.48
TSR3-202ENST00000566296 SFI1A8K8P3 1242 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 TBC1D4O60343 1298 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 PLS3P13797 630 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 CD72P21854 359 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 MARCKSP29966 332 aaPredicted RBP18.03■□□□□ 0.48
TSR3-202ENST00000566296 MATR3P43243 847 aaKnown RBP eCLIP18.03■□□□□ 0.48
TSR3-202ENST00000566296 MCM2P49736 904 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 CSTF1Q05048 431 aaKnown RBP18.03■□□□□ 0.48
TSR3-202ENST00000566296 MRPL58Q14197 206 aaKnown RBP18.03■□□□□ 0.48
TSR3-202ENST00000566296 TANGO2Q6ICL3 276 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 ZPBP2Q6X784 338 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 ZNF852Q6ZMS4 543 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 MAML2Q8IZL2 1156 aaPredicted RBP18.03■□□□□ 0.48
TSR3-202ENST00000566296 LEMD2Q8NC56 503 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 DDX12PQ92771 950 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 BICD1Q96G01 975 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 ZBTB45Q96K62 511 aaPredicted RBP18.03■□□□□ 0.48
TSR3-202ENST00000566296 PLA2G2FQ9BZM2 168 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 BRD9Q9H8M2 597 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.03■□□□□ 0.48
TSR3-202ENST00000566296 MAFFQ9ULX9 164 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 MTF2Q9Y483 593 aaPredicted RBP18.03■□□□□ 0.48
TSR3-202ENST00000566296 PCDHGA2Q9Y5H1 932 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 ZNF292O60281 2723 aa18.03■□□□□ 0.48
TSR3-202ENST00000566296 CLDN3O15551 220 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 MICAL2O94851 1124 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 SEC24AO95486 1093 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 ADCY1Q08828 1119 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 RAD51AP2Q09MP3 1159 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 GRM2Q14416 872 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 RILPL1Q5EBL4 403 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 MCTP1Q6DN14 999 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 KCTD17Q8N5Z5 321 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 TMEM161BQ8NDZ6 487 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 ATRIPQ8WXE1 791 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 RMDN1Q96DB5 314 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 TCEAL4Q96EI5 215 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 ZNF512Q96ME7 567 aaPredicted RBP18.02■□□□□ 0.48
TSR3-202ENST00000566296 MMTAG2Q9BU76 263 aaKnown RBP18.02■□□□□ 0.48
TSR3-202ENST00000566296 ASAH2Q9NR71 780 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 HEBP1Q9NRV9 189 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 NCDNQ9UBB6 729 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 TUBGCP4Q9UGJ1 667 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 PCDHB8Q9UN66 801 aa18.02■□□□□ 0.48
TSR3-202ENST00000566296 H0YCG3 227 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 MAN2B1O00754 1011 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 CXCL8P10145 99 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 FCARP24071 287 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 RPS9P46781 194 aaKnown RBP18.01■□□□□ 0.47
TSR3-202ENST00000566296 ATP2C1P98194 919 aaPredicted RBP18.01■□□□□ 0.47
TSR3-202ENST00000566296 TWF1Q12792 350 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 IL17AQ16552 155 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 SLC10A6Q3KNW5 377 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 FAM78AQ5JUQ0 283 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 HYIQ5T013 277 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 DGLUCYQ7Z3D6 616 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 SYT2Q8N9I0 419 aaPredicted RBP18.01■□□□□ 0.47
TSR3-202ENST00000566296 IRF7Q92985 503 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 CLDN23Q96B33 292 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 ASB16Q96NS5 453 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 NTPCRQ9BSD7 190 aaKnown RBP18.01■□□□□ 0.47
TSR3-202ENST00000566296 TRMT61BQ9BVS5 477 aaKnown RBP18.01■□□□□ 0.47
TSR3-202ENST00000566296 PLEKHA5Q9HAU0 1116 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 KCND2Q9NZV8 630 aa18.01■□□□□ 0.47
TSR3-202ENST00000566296 XPOTO43592 962 aaKnown RBP18■□□□□ 0.47
TSR3-202ENST00000566296 CLTAP09496 248 aa18■□□□□ 0.47
TSR3-202ENST00000566296 MAPTP10636 758 aaKnown RBP18■□□□□ 0.47
TSR3-202ENST00000566296 MYL4P12829 197 aa18■□□□□ 0.47
TSR3-202ENST00000566296 YWHAHQ04917 246 aaPredicted RBP18■□□□□ 0.47
TSR3-202ENST00000566296 PPP2R3AQ06190 1150 aa18■□□□□ 0.47
TSR3-202ENST00000566296 MCL1Q07820 350 aa18■□□□□ 0.47
TSR3-202ENST00000566296 PLD1Q13393 1074 aa18■□□□□ 0.47
TSR3-202ENST00000566296 PUM1Q14671 1186 aaKnown RBP eCLIP18■□□□□ 0.47
TSR3-202ENST00000566296 SEZ6Q53EL9 994 aa18■□□□□ 0.47
TSR3-202ENST00000566296 SUMF1Q8NBK3 374 aa18■□□□□ 0.47
TSR3-202ENST00000566296 DEPDC1BQ8WUY9 529 aa18■□□□□ 0.47
TSR3-202ENST00000566296 SMARCD2Q92925 531 aa18■□□□□ 0.47
TSR3-202ENST00000566296 SECISBP2LQ93073 1101 aaKnown RBP18■□□□□ 0.47
TSR3-202ENST00000566296 KIF12Q96FN5 646 aa18■□□□□ 0.47
TSR3-202ENST00000566296 OXCT2Q9BYC2 517 aaPredicted RBP18■□□□□ 0.47
TSR3-202ENST00000566296 ZSCAN32Q9NX65 697 aa18■□□□□ 0.47
TSR3-202ENST00000566296 LARSQ9P2J5 1176 aaKnown RBP18■□□□□ 0.47
TSR3-202ENST00000566296 UBQLN1Q9UMX0 589 aaKnown RBP18■□□□□ 0.47
TSR3-202ENST00000566296 YIPF1Q9Y548 306 aa18■□□□□ 0.47
TSR3-202ENST00000566296 TICRRQ7Z2Z1 1910 aa18■□□□□ 0.47
TSR3-202ENST00000566296 DCHS1Q96JQ0 3298 aa17.99■□□□□ 0.47
TSR3-202ENST00000566296 VWA3AA6NCI4 1184 aa17.99■□□□□ 0.47
TSR3-202ENST00000566296 MEFVO15553 781 aaPredicted RBP17.99■□□□□ 0.47
TSR3-202ENST00000566296 PLA2G4BP0C869 781 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms