RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 PDCP20941 246 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 MARCKSP29966 332 aaPredicted RBP19.95■□□□□ 0.78
USB1-213ENST00000566292 NMT1P30419 496 aaKnown RBP19.95■□□□□ 0.78
USB1-213ENST00000566292 LRPAP1P30533 357 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 GUCY2FP51841 1108 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 SLC5A9Q2M3M2 681 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 CTXN3Q4LDR2 81 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 FAM173BQ6P4H8 233 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 POTEHQ6S545 545 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 NPAS3Q8IXF0 933 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 ING5Q8WYH8 240 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 KIF12Q96FN5 646 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 ZHX3Q9H4I2 956 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 FBXO2Q9UK22 296 aaPredicted RBP19.95■□□□□ 0.78
USB1-213ENST00000566292 PCDHB8Q9UN66 801 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 TSC2P49815 1807 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 A0A0B4J269 797 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 ADRB2P07550 413 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 RHOP08100 348 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 CYP3A5P20815 502 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 SYT1P21579 422 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 SCP2P22307 547 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 DDIT3P35638 169 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 GTF2BQ00403 316 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 PPP2R3AQ06190 1150 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 ZNF280DQ6N043 979 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 MAP4K3Q8IVH8 894 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 CCDC105Q8IYK2 499 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 TCEAL8Q8IYN2 117 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 APPL2Q8NEU8 664 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 TBC1D17Q9HA65 648 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 CYP4F11Q9HBI6 524 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 KCNH3Q9ULD8 1083 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 UBQLN1Q9UMX0 589 aaKnown RBP19.94■□□□□ 0.78
USB1-213ENST00000566292 MIA3Q5JRA6 1907 aa19.94■□□□□ 0.78
USB1-213ENST00000566292 SCN1AP35498 2009 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 ANKRD63C9JTQ0 380 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 M0QZQ0 153 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 PRRG1O14668 218 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 TBCAO75347 108 aaKnown RBP19.93■□□□□ 0.78
USB1-213ENST00000566292 LRG1P02750 347 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 ELF1P32519 619 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 AARSP49588 968 aaKnown RBP eCLIP19.93■□□□□ 0.78
USB1-213ENST00000566292 GPC5P78333 572 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 KYAT1Q16773 422 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 ZC2HC1CQ53FD0 456 aaPredicted RBP19.93■□□□□ 0.78
USB1-213ENST00000566292 TPGS2Q68CL5 300 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 MTSS1LQ765P7 747 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 DTWD2Q8NBA8 298 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 CLIC6Q96NY7 704 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 RPF1Q9H9Y2 349 aaKnown RBP19.93■□□□□ 0.78
USB1-213ENST00000566292 AVENQ9NQS1 362 aaPredicted RBP19.93■□□□□ 0.78
USB1-213ENST00000566292 ARHGEF3Q9NR81 526 aa19.93■□□□□ 0.78
USB1-213ENST00000566292 CPSF3Q9UKF6 684 aaKnown RBP19.93■□□□□ 0.78
USB1-213ENST00000566292 MRPS23Q9Y3D9 190 aaKnown RBP19.93■□□□□ 0.78
USB1-213ENST00000566292 SRPRBQ9Y5M8 271 aaKnown RBP19.93■□□□□ 0.78
USB1-213ENST00000566292 TISP43B9A030 160 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 PROB1E7EW31 1015 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 STK25O00506 426 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 PPEF2O14830 753 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 PTPN2P17706 415 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 KXD1Q9BQD3 176 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 MSTO1Q9BUK6 570 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 AFF4Q9UHB7 1163 aaKnown RBP19.92■□□□□ 0.78
USB1-213ENST00000566292 TIMM13Q9Y5L4 95 aaPredicted RBP19.92■□□□□ 0.78
USB1-213ENST00000566292 INSL5Q9Y5Q6 135 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 TCHHQ07283 1943 aa19.92■□□□□ 0.78
USB1-213ENST00000566292 GFRA3O60609 400 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 CEBPBP17676 345 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 NBL1P41271 181 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 CEBPZQ03701 1054 aaKnown RBP19.91■□□□□ 0.78
USB1-213ENST00000566292 ADCY1Q08828 1119 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 PRSS36Q5K4E3 855 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 JADE1Q6IE81 842 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 PHLDB3Q6NSJ2 640 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 DYMQ7RTS9 669 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 FAM212AQ96EL1 285 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 MCRS1Q96EZ8 462 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 INTS4Q96HW7 963 aaKnown RBP19.91■□□□□ 0.78
USB1-213ENST00000566292 CORO1BQ9BR76 489 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 BACH2Q9BYV9 841 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 IKZF4Q9H2S9 585 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 ST6GALNAC4Q9H4F1 302 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 STK17AQ9UEE5 414 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.91■□□□□ 0.78
USB1-213ENST00000566292 VPS13AQ96RL7 3174 aa19.91■□□□□ 0.78
USB1-213ENST00000566292 NRG2O14511 850 aaPredicted RBP19.9■□□□□ 0.78
USB1-213ENST00000566292 XPOTO43592 962 aaKnown RBP19.9■□□□□ 0.78
USB1-213ENST00000566292 OAZ2O95190 189 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 VNN2O95498 520 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 RFX1P22670 979 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 YWHAHQ04917 246 aaPredicted RBP19.9■□□□□ 0.78
USB1-213ENST00000566292 SPATA1Q5VX52 437 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 RNF19BQ6ZMZ0 732 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 SFR1Q86XK3 245 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 KRI1Q8N9T8 703 aaKnown RBP19.9■□□□□ 0.78
USB1-213ENST00000566292 TCEAL4Q96EI5 215 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 TSPAN18Q96SJ8 248 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 FOXD4L1Q9NU39 408 aa19.9■□□□□ 0.78
USB1-213ENST00000566292 GDE1Q9NZC3 331 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms