RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 C4BPAP04003 597 aaKnown RBP18.05■□□□□ 0.48
RAB40C-210ENST00000566290 MARK3P27448 753 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 NLRP11P59045 1033 aaKnown RBP18.05■□□□□ 0.48
RAB40C-210ENST00000566290 MBTD1Q05BQ5 628 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 HIC1Q14526 733 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 EFCAB12Q6NXP0 572 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 ZNF365Q70YC5 407 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 ZNF410Q86VK4 478 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 ZNF677Q86XU0 584 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 GPR161Q8N6U8 529 aaKnown RBP18.05■□□□□ 0.48
RAB40C-210ENST00000566290 TAS1R2Q8TE23 839 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 SEMA4DQ92854 862 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 CCDC127Q96BQ5 260 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 RNPEPQ9H4A4 650 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 UBE2TQ9NPD8 197 aaPredicted RBP18.05■□□□□ 0.48
RAB40C-210ENST00000566290 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 CPSF3Q9UKF6 684 aaKnown RBP18.05■□□□□ 0.48
RAB40C-210ENST00000566290 YBX2Q9Y2T7 364 aaKnown RBP18.05■□□□□ 0.48
RAB40C-210ENST00000566290 HYOU1Q9Y4L1 999 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 MACROD2A1Z1Q3 448 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 H3BRB1 525 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 HAS3O00219 553 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 FOXN3O00409 490 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 ATP1A1P05023 1023 aaKnown RBP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 EDN1P05305 212 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 CSF2RAP15509 400 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 TBXAS1P24557 533 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 PSEN2P49810 448 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 ARID5AQ03989 594 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 PPIGQ13427 754 aaKnown RBP eCLIP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 PRPF4BQ13523 1007 aaKnown RBP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 PPP1R2P3Q6NXS1 205 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 NFRKBQ6P4R8 1299 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 PDCL2Q8N4E4 241 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 LNX1Q8TBB1 728 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 SNX27Q96L92 541 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 KREMEN1Q96MU8 473 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 AGPAT1Q99943 283 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 WNT8AQ9H1J5 351 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 ISCUQ9H1K1 167 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 FAM124BQ9H5Z6 455 aaPredicted RBP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 TUT1Q9H6E5 874 aaKnown RBP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 C1orf112Q9NSG2 853 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 NOCTQ9UK39 431 aaKnown RBP18.04■□□□□ 0.48
RAB40C-210ENST00000566290 CNTN6Q9UQ52 1028 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 DUSP10Q9Y6W6 482 aa18.04■□□□□ 0.48
RAB40C-210ENST00000566290 GPR37L1O60883 481 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 IL18RAPO95256 599 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 MCF2P10911 925 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 H2AFXP16104 143 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-210ENST00000566290 KLRC1P26715 233 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 BPIFB4P59827 614 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 MFSD10Q14728 455 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 GDF6Q6KF10 455 aaPredicted RBP18.03■□□□□ 0.48
RAB40C-210ENST00000566290 MTHFD1LQ6UB35 978 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 SLFN11Q7Z7L1 901 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 LRRC71Q8N4P6 559 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 EPS8L1Q8TE68 723 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 LMBR1Q8WVP7 490 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 RFFLQ8WZ73 363 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 RUBCNQ92622 972 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 VWCEQ96DN2 955 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 SEZ6LQ9BYH1 1024 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 HIPK3Q9H422 1215 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 SUGCTQ9HAC7 445 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 HDAC6Q9UBN7 1215 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 SALL4Q9UJQ4 1053 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 PRRC2BQ5JSZ5 2229 aaKnown RBP18.03■□□□□ 0.48
RAB40C-210ENST00000566290 GBF1Q92538 1859 aa18.03■□□□□ 0.48
RAB40C-210ENST00000566290 MBLAC1A4D2B0 266 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-210ENST00000566290 CTAGE15A4D2H0 777 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 ANKRD62A6NC57 917 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 MOCS3O95396 460 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 CTAGE8P0CG41 777 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 CCL23P55773 120 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 ZNF200P98182 395 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-210ENST00000566290 RAB30Q15771 203 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 AAK1Q2M2I8 961 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 WDR44Q5JSH3 913 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 ATF7IP2Q5U623 682 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 CTAGE6Q86UF2 777 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 RHPN2Q8IUC4 686 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 CTAGE4Q8IX94 777 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 RHOT2Q8IXI1 618 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 SYCE1Q8N0S2 351 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 MSANTD4Q8NCY6 345 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 ZNF516Q92618 1163 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 SLC28A3Q9HAS3 691 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 TFR2Q9UP52 801 aa18.02■□□□□ 0.48
RAB40C-210ENST00000566290 NRCAMQ92823 1304 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 MTA2O94776 668 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 HLA-DRAP01903 254 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 DLATP10515 647 aaKnown RBP18.01■□□□□ 0.47
RAB40C-210ENST00000566290 TNFAIP3P21580 790 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 PPFIA1Q13136 1202 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 SKIV2LQ15477 1246 aaKnown RBP18.01■□□□□ 0.47
RAB40C-210ENST00000566290 ELF2Q15723 593 aa18.01■□□□□ 0.47
RAB40C-210ENST00000566290 GRIK4Q16099 956 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms