RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 C9orf57Q5W0N0 161 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 TMCO2Q7Z6W1 182 aaPredicted RBP8.38□□□□□ -1.07
CDH1-208ENST00000565810 ZNF280BQ86YH2 543 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 COLGALT2Q8IYK4 626 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 HPDLQ96IR7 371 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 NT5C1BQ96P26 610 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 ERGIC2Q96RQ1 377 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 CRACR2AQ9BSW2 395 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 NUP58Q9BVL2 599 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 NRDE2Q9H7Z3 1164 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 GOLGA2P5Q9HBQ8 144 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 SIX4Q9UIU6 781 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 PLAGL2Q9UPG8 496 aa8.38□□□□□ -1.07
CDH1-208ENST00000565810 ANO9A1A5B4 782 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 NRP1O14786 923 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 TRAPPC3O43617 180 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 DDHD2O94830 711 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 ADCY5O95622 1261 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 STAU1O95793 577 aaKnown RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 GALTP07902 379 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 TPM1P09493 284 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 TRIM21P19474 475 aaKnown RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 SLC9A1P19634 815 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 PON1P27169 355 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 ZNF75DP51815 510 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 BCAR1P56945 870 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 MYL6P60660 151 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 TNNC1P63316 161 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 NOP14P78316 857 aaKnown RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 SOX4Q06945 474 aaPredicted RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 DSC1Q08554 894 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 KCNMA1Q12791 1236 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 ELAVL2Q12926 359 aaKnown RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 NAB2Q15742 525 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 EPC2Q52LR7 807 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 DSTYKQ6XUX3 929 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 ENOSF1Q7L5Y1 443 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 DRC7Q8IY82 874 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 TDHQ8IZJ6 230 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 NEK11Q8NG66 645 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 SEMA4DQ92854 862 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 IQCDQ96DY2 449 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 MRFAP1L1Q96HT8 127 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 FAXDC2Q96IV6 333 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 FAM84AQ96KN4 292 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 ZNF558Q96NG5 402 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 LSM14BQ9BX40 385 aaKnown RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 DNAI2Q9GZS0 605 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 INTS2Q9H0H0 1204 aaKnown RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 VRTNQ9H8Y1 702 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 RC3H2Q9HBD1 1191 aaKnown RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 NXF1Q9UBU9 619 aaKnown RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 MSRAQ9UJ68 235 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 PRG3Q9Y2Y8 225 aaPredicted RBP8.37□□□□□ -1.07
CDH1-208ENST00000565810 RWDD3Q9Y3V2 267 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 DAAM1Q9Y4D1 1078 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 PCDHB12Q9Y5F1 795 aa8.37□□□□□ -1.07
CDH1-208ENST00000565810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDH1-208ENST00000565810 SIP14410 1827 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 GOLGA6L6A8MZA4 724 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 KPNA7A9QM74 516 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 TMEM189-UBE2V1I3L0A0 370 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 HUS1O60921 280 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 VNN1O95497 513 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 ASS1P00966 412 aaKnown RBP8.36□□□□□ -1.07
CDH1-208ENST00000565810 RFX1P22670 979 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 TBXAS1P24557 533 aaPredicted RBP8.36□□□□□ -1.07
CDH1-208ENST00000565810 PPM1AP35813 382 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 SLC11A1P49279 550 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 LILRA4P59901 499 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 YWHAEP62258 255 aaKnown RBP8.36□□□□□ -1.07
CDH1-208ENST00000565810 LRMPQ12912 555 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 TRIM14Q14142 442 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 RAB30Q15771 203 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 WDR72Q3MJ13 1102 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 KLHDC7AQ5VTJ3 777 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 SPECC1LQ69YQ0 1117 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 TRIM65Q6PJ69 517 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 KCNT2Q6UVM3 1135 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 CHRDL2Q6WN34 429 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 CACNA2D4Q7Z3S7 1137 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 PPFIBP1Q86W92 1011 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 METTL23Q86XA0 190 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 PPM1KQ8N3J5 372 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 TTC39CQ8N584 583 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 ZNF397Q8NF99 534 aaPredicted RBP8.36□□□□□ -1.07
CDH1-208ENST00000565810 TMEM169Q96HH4 297 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 MMS19Q96T76 1030 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 PI4K2AQ9BTU6 479 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 CWH43Q9H720 699 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 CYP3A43Q9HB55 503 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 UBE2TQ9NPD8 197 aaPredicted RBP8.36□□□□□ -1.07
CDH1-208ENST00000565810 PLCB1Q9NQ66 1216 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDH1-208ENST00000565810 FAM207AQ9NSI2 230 aaPredicted RBP8.36□□□□□ -1.07
CDH1-208ENST00000565810 APEX2Q9UBZ4 518 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 DNAJB4Q9UDY4 337 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 STK39Q9UEW8 545 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 PCDHA11Q9Y5I1 949 aa8.36□□□□□ -1.07
CDH1-208ENST00000565810 SNX9Q9Y5X1 595 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms