RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 TMEM270Q6UE05 265 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 DNAAF5Q86Y56 855 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 UBR7Q8N806 425 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 CEP112Q8N8E3 955 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 SLAIN1Q8ND83 568 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 RFFLQ8WZ73 363 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 PCDHB18PQ96TA0 734 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 EIF2AQ9BY44 585 aaKnown RBP20.96■□□□□ 0.95
CLN6-205ENST00000564846 SIX4Q9UIU6 781 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 TSKSQ9UJT2 592 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 ITGA11Q9UKX5 1188 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 TRPV2Q9Y5S1 764 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 NCANO14594 1321 aa20.96■□□□□ 0.95
CLN6-205ENST00000564846 FTLP02792 175 aaPredicted RBP20.95■□□□□ 0.94
CLN6-205ENST00000564846 RBBP8NLQ8NC74 664 aaPredicted RBP20.95■□□□□ 0.94
CLN6-205ENST00000564846 CALR3Q96L12 384 aaKnown RBP20.95■□□□□ 0.94
CLN6-205ENST00000564846 CDY2AQ9Y6F7 541 aa20.95■□□□□ 0.94
CLN6-205ENST00000564846 THSD7BQ9C0I4 1608 aa20.95■□□□□ 0.94
CLN6-205ENST00000564846 TRIP12Q14669 1992 aaPredicted RBP20.95■□□□□ 0.94
CLN6-205ENST00000564846 ITGB3P05106 788 aa20.95■□□□□ 0.94
CLN6-205ENST00000564846 ABCB4P21439 1286 aa20.95■□□□□ 0.94
CLN6-205ENST00000564846 YWHAEP62258 255 aaKnown RBP20.95■□□□□ 0.94
CLN6-205ENST00000564846 CXorf38Q8TB03 319 aa20.95■□□□□ 0.94
CLN6-205ENST00000564846 ZNF296Q8WUU4 475 aaPredicted RBP20.95■□□□□ 0.94
CLN6-205ENST00000564846 SNX27Q96L92 541 aa20.95■□□□□ 0.94
CLN6-205ENST00000564846 VRTNQ9H8Y1 702 aa20.95■□□□□ 0.94
CLN6-205ENST00000564846 SNTG2Q9NY99 539 aa20.95■□□□□ 0.94
CLN6-205ENST00000564846 EFCAB8A8MWE9 144 aa20.94■□□□□ 0.94
CLN6-205ENST00000564846 ASPAP45381 313 aa20.94■□□□□ 0.94
CLN6-205ENST00000564846 ZNF132P52740 706 aa20.94■□□□□ 0.94
CLN6-205ENST00000564846 ZNF667Q5HYK9 610 aa20.94■□□□□ 0.94
CLN6-205ENST00000564846 RHOT2Q8IXI1 618 aa20.94■□□□□ 0.94
CLN6-205ENST00000564846 KIF12Q96FN5 646 aa20.94■□□□□ 0.94
CLN6-205ENST00000564846 THAP2Q9H0W7 228 aa20.94■□□□□ 0.94
CLN6-205ENST00000564846 SNX12Q9UMY4 172 aa20.94■□□□□ 0.94
CLN6-205ENST00000564846 GRID2IPA4D2P6 1211 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 INHAP05111 366 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 TCEAL1Q15170 157 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 FAM228AQ86W67 206 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 TPCN2Q8NHX9 752 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 TSPAN18Q96SJ8 248 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 CISHQ9NSE2 258 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 DPP3Q9NY33 737 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 GRIN2DO15399 1336 aa20.93■□□□□ 0.94
CLN6-205ENST00000564846 TADA3O75528 432 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 STAU1O95793 577 aaKnown RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 P4HA1P13674 534 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 TCP1P17987 556 aaKnown RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 GNA15P30679 374 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 GPC5P78333 572 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 RBP5P82980 135 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 HTRA3P83110 453 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 PTPN11Q06124 597 aaPredicted RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 CLEC16AQ2KHT3 1053 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 UBXN11Q5T124 520 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 TRIM72Q6ZMU5 477 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 LRRN4CLQ8ND94 238 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 SLC35G2Q8TBE7 412 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 NOC2LQ9Y3T9 749 aaKnown RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 HYOU1Q9Y4L1 999 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 MOXD2PA6NHM9 499 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 POLR2BP30876 1174 aaKnown RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 ACLYP53396 1101 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 PTGISQ16647 500 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 WDR72Q3MJ13 1102 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 ACAD10Q6JQN1 1059 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 ALKAL1Q6UXT8 129 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 SYCE1Q8N0S2 351 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 TLR10Q9BXR5 811 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 BCO2Q9BYV7 579 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 SENP6Q9GZR1 1112 aaPredicted RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 NXF3Q9H4D5 531 aaKnown RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 HMX1Q9NP08 348 aaPredicted RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 CNTN3Q9P232 1028 aa20.92■□□□□ 0.94
CLN6-205ENST00000564846 NXF1Q9UBU9 619 aaKnown RBP20.92■□□□□ 0.94
CLN6-205ENST00000564846 RPS6KA5O75582 802 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 RECQL4O94761 1208 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 HADHBP55084 474 aaKnown RBP20.91■□□□□ 0.94
CLN6-205ENST00000564846 TUBB4BP68371 445 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 MGAT3Q09327 533 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 ITGA7Q13683 1181 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 MEI1Q5TIA1 1274 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 LRRC57Q8N9N7 239 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 TSC1Q92574 1164 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 UBXN4Q92575 508 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 WNT8BQ93098 351 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 ARHGEF26Q96DR7 871 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 TSEN34Q9BSV6 310 aaKnown RBP20.91■□□□□ 0.94
CLN6-205ENST00000564846 PDCL3Q9H2J4 239 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 FAM124BQ9H5Z6 455 aaPredicted RBP20.91■□□□□ 0.94
CLN6-205ENST00000564846 AGAP1Q9UPQ3 857 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 HES2Q9Y543 173 aa20.91■□□□□ 0.94
CLN6-205ENST00000564846 UNGP13051 313 aaPredicted RBP20.9■□□□□ 0.94
CLN6-205ENST00000564846 CD58P19256 250 aa20.9■□□□□ 0.94
CLN6-205ENST00000564846 GRK4P32298 578 aa20.9■□□□□ 0.94
CLN6-205ENST00000564846 CKAP4Q07065 602 aaKnown RBP20.9■□□□□ 0.94
CLN6-205ENST00000564846 ZBTB6Q15916 424 aa20.9■□□□□ 0.94
CLN6-205ENST00000564846 PPP1R2P3Q6NXS1 205 aa20.9■□□□□ 0.94
CLN6-205ENST00000564846 SLFN11Q7Z7L1 901 aa20.9■□□□□ 0.94
CLN6-205ENST00000564846 HPDLQ96IR7 371 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms