RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CITO14578 2027 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 MOCS3O95396 460 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 CST3P01034 146 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-210ENST00000564587 ACO1P21399 889 aaKnown RBP16.67■□□□□ 0.26
COMMD4-210ENST00000564587 GALCP54803 685 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 MYL6P60660 151 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 RBP5P82980 135 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 ZNF667Q5HYK9 610 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 JADE1Q6IE81 842 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 NOP9Q86U38 636 aaKnown RBP16.67■□□□□ 0.26
COMMD4-210ENST00000564587 SLC47A2Q86VL8 602 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 RHOT2Q8IXI1 618 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 HACE1Q8IYU2 909 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 OLIG1Q8TAK6 271 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 RFFLQ8WZ73 363 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 CYP3A43Q9HB55 503 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 HMX1Q9NP08 348 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-210ENST00000564587 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.67■□□□□ 0.26
COMMD4-210ENST00000564587 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 RALGAPA2Q2PPJ7 1873 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 NCANO14594 1321 aa16.67■□□□□ 0.26
COMMD4-210ENST00000564587 CAND2O75155 1236 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 NFICP08651 508 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 CHRNB2P17787 502 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 TCP1P17987 556 aaKnown RBP16.66■□□□□ 0.26
COMMD4-210ENST00000564587 FGFR4P22455 802 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 NOP2P46087 812 aaKnown RBP16.66■□□□□ 0.26
COMMD4-210ENST00000564587 AMPD2Q01433 879 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 CAP1Q01518 475 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 SPOPLQ6IQ16 392 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 GDF6Q6KF10 455 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-210ENST00000564587 TMEM192Q8IY95 271 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 UBR7Q8N806 425 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 ARRDC4Q8NCT1 418 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 SLC20A1Q8WUM9 679 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 TRIM11Q96F44 468 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 PACSIN1Q9BY11 444 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 XYLT2Q9H1B5 865 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 PIN4Q9Y237 131 aaKnown RBP16.66■□□□□ 0.26
COMMD4-210ENST00000564587 CDY2AQ9Y6F7 541 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 MYH10P35580 1976 aa16.66■□□□□ 0.26
COMMD4-210ENST00000564587 KRT19P08727 400 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 GRK4P32298 578 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 HADHBP55084 474 aaKnown RBP16.65■□□□□ 0.26
COMMD4-210ENST00000564587 GPC5P78333 572 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 FMO1Q01740 532 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 CKAP4Q07065 602 aaKnown RBP16.65■□□□□ 0.26
COMMD4-210ENST00000564587 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 PTK7Q13308 1070 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 TMEM270Q6UE05 265 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 C1orf127Q8N9H9 656 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 RBBP8NLQ8NC74 664 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-210ENST00000564587 BEST2Q8NFU1 509 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 DDX1Q92499 740 aaKnown RBP16.65■□□□□ 0.26
COMMD4-210ENST00000564587 KIF12Q96FN5 646 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 SNX27Q96L92 541 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 GLT1D1Q96MS3 346 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 BEGAINQ9BUH8 593 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 DPP3Q9NY33 737 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 SQORQ9Y6N5 450 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 CAPN6Q9Y6Q1 641 aa16.65■□□□□ 0.26
COMMD4-210ENST00000564587 EFCAB8A8MWE9 144 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 GPR182O15218 404 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 BUB1O43683 1085 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 RPS6KA5O75582 802 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 CD4P01730 458 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 FTLP02792 175 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-210ENST00000564587 INHAP05111 366 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 MMEP08473 750 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 MYBL1P10243 752 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 ZNF132P52740 706 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 ACLYP53396 1101 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 PTGISQ16647 500 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 ACAD10Q6JQN1 1059 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 FAM43BQ6ZT52 329 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-210ENST00000564587 ZNF296Q8WUU4 475 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-210ENST00000564587 TMEM40Q8WWA1 233 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 FAM84AQ96KN4 292 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 ARID3AQ99856 593 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 BCO2Q9BYV7 579 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 PDCL3Q9H2J4 239 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 SNTG2Q9NY99 539 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 CNTN3Q9P232 1028 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 RNF14Q9UBS8 474 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 SIX4Q9UIU6 781 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 SALL4Q9UJQ4 1053 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 UBQLN1Q9UMX0 589 aaKnown RBP16.64■□□□□ 0.25
COMMD4-210ENST00000564587 HYOU1Q9Y4L1 999 aa16.64■□□□□ 0.25
COMMD4-210ENST00000564587 PALMO75781 387 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 ATP1A1P05023 1023 aaKnown RBP16.63■□□□□ 0.25
COMMD4-210ENST00000564587 ITGB3P05106 788 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 ATF7P17544 494 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-210ENST00000564587 CYP3A5P20815 502 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 GNA15P30679 374 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 CLEC16AQ2KHT3 1053 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 XKR4Q5GH76 650 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 TAF3Q5VWG9 929 aa16.63■□□□□ 0.25
COMMD4-210ENST00000564587 ALKAL1Q6UXT8 129 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms