RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 FIGNQ5HY92 759 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 C9orf57Q5W0N0 161 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 SPECC1LQ69YQ0 1117 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 VSTM4Q8IW00 320 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 CMTR2Q8IYT2 770 aaKnown RBP20.23■□□□□ 0.83
SPNS1-206ENST00000564476 C18orf25Q96B23 403 aaPredicted RBP20.23■□□□□ 0.83
SPNS1-206ENST00000564476 PCMTD1Q96MG8 357 aaPredicted RBP20.23■□□□□ 0.83
SPNS1-206ENST00000564476 TMEM175Q9BSA9 504 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 SIX4Q9UIU6 781 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 FBXL5Q9UKA1 691 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 PLAGL2Q9UPG8 496 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 AGAP1Q9UPQ3 857 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
SPNS1-206ENST00000564476 SOX1O00570 391 aaPredicted RBP20.22■□□□□ 0.83
SPNS1-206ENST00000564476 GJB5O95377 273 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 ASS1P00966 412 aaKnown RBP20.22■□□□□ 0.83
SPNS1-206ENST00000564476 ALDH2P05091 517 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 KRT19P08727 400 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 HTRA4P83105 476 aaPredicted RBP20.22■□□□□ 0.83
SPNS1-206ENST00000564476 TRIM14Q14142 442 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 TRIM65Q6PJ69 517 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 DCLRE1AQ6PJP8 1040 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 NEK11Q8NG66 645 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 ZNF560Q96MR9 790 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 CRACR2AQ9BSW2 395 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 INTS2Q9H0H0 1204 aaKnown RBP20.22■□□□□ 0.83
SPNS1-206ENST00000564476 FAM124BQ9H5Z6 455 aaPredicted RBP20.22■□□□□ 0.83
SPNS1-206ENST00000564476 TUBGCP4Q9UGJ1 667 aa20.22■□□□□ 0.83
SPNS1-206ENST00000564476 PTPRSQ13332 1948 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 SZT2Q5T011 3432 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 FAM163BP0C2L3 166 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 P4HA1P13674 534 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 SLC9A1P19634 815 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 POLR2BP30876 1174 aaKnown RBP20.21■□□□□ 0.83
SPNS1-206ENST00000564476 SOX4Q06945 474 aaPredicted RBP20.21■□□□□ 0.83
SPNS1-206ENST00000564476 ENOSF1Q7L5Y1 443 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 COLGALT2Q8IYK4 626 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 SEMA4DQ92854 862 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 JAKMIP2Q96AA8 810 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 HPDLQ96IR7 371 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 NT5C1BQ96P26 610 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 RAD9AQ99638 391 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 ZBED2Q9BTP6 218 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 XYLT2Q9H1B5 865 aa20.21■□□□□ 0.83
SPNS1-206ENST00000564476 RC3H2Q9HBD1 1191 aaKnown RBP20.21■□□□□ 0.83
SPNS1-206ENST00000564476 CXXC1Q9P0U4 656 aaPredicted RBP20.21■□□□□ 0.83
SPNS1-206ENST00000564476 TMEM189-UBE2V1I3L0A0 370 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 DDHD2O94830 711 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 ATP2A2P16615 1042 aaKnown RBP20.2■□□□□ 0.82
SPNS1-206ENST00000564476 MYL6P60660 151 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 UPP1Q16831 310 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 SV2CQ496J9 727 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 KLHDC7AQ5VTJ3 777 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 HERC6Q8IVU3 1022 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 YME1L1Q96TA2 773 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 COLEC11Q9BWP8 271 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 UBE2OQ9C0C9 1292 aaKnown RBP20.2■□□□□ 0.82
SPNS1-206ENST00000564476 APEX2Q9UBZ4 518 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 SCN1AP35498 2009 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 LAMA3Q16787 3333 aa20.2■□□□□ 0.82
SPNS1-206ENST00000564476 ARHGEF37A1IGU5 675 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 PODXLO00592 558 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 TBXAS1P24557 533 aaPredicted RBP20.19■□□□□ 0.82
SPNS1-206ENST00000564476 TAF6P49848 677 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 GCNT1Q02742 428 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 ZNF699Q32M78 642 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 ZNF667Q5HYK9 610 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 DPY19L2P1Q6NXN4 242 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 ZNF280BQ86YH2 543 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 LRCH3Q96II8 777 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 FAM84AQ96KN4 292 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 LSM14BQ9BX40 385 aaKnown RBP20.19■□□□□ 0.82
SPNS1-206ENST00000564476 NRDE2Q9H7Z3 1164 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 GDAP2Q9NXN4 497 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 IMPACTQ9P2X3 320 aa20.19■□□□□ 0.82
SPNS1-206ENST00000564476 A0A1W2PQJ5 194 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 TPM1P09493 284 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 TRIM21P19474 475 aaKnown RBP20.18■□□□□ 0.82
SPNS1-206ENST00000564476 CLCNKBP51801 687 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 GUCY2FP51841 1108 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 MFAP3P55082 362 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 LILRA4P59901 499 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 NOP14P78316 857 aaKnown RBP20.18■□□□□ 0.82
SPNS1-206ENST00000564476 BTG3Q14201 252 aaPredicted RBP20.18■□□□□ 0.82
SPNS1-206ENST00000564476 DPH6Q7L8W6 267 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 PPFIBP1Q86W92 1011 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 FMNL3Q8IVF7 1028 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 TDHQ8IZJ6 230 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 TTC39CQ8N584 583 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 RNPC3Q96LT9 517 aaKnown RBP20.18■□□□□ 0.82
SPNS1-206ENST00000564476 CYP3A43Q9HB55 503 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 GOLGA2P5Q9HBQ8 144 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 SIX2Q9NPC8 291 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 FAM207AQ9NSI2 230 aaPredicted RBP20.18■□□□□ 0.82
SPNS1-206ENST00000564476 FAN1Q9Y2M0 1017 aa20.18■□□□□ 0.82
SPNS1-206ENST00000564476 CASTOR2A6NHX0 329 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 GOLGA6L6A8MZA4 724 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 KPNA7A9QM74 516 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 B3GAT3O94766 335 aa20.17■□□□□ 0.82
SPNS1-206ENST00000564476 GALTP07902 379 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms