RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 OAZ2O95190 189 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 NBL1P41271 181 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 NTHL1P78549 312 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 GTF2BQ00403 316 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 PFKPQ01813 784 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
SPG7-210ENST00000564409 MCM6Q14566 821 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 KARSQ15046 597 aaKnown RBP16.33■□□□□ 0.2
SPG7-210ENST00000564409 CTXN3Q4LDR2 81 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 SLFN12LQ6IEE8 588 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 ELMOD1Q8N336 334 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 KRI1Q8N9T8 703 aaKnown RBP16.33■□□□□ 0.2
SPG7-210ENST00000564409 DDX12PQ92771 950 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 PHOX2BQ99453 314 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 RPF1Q9H9Y2 349 aaKnown RBP16.33■□□□□ 0.2
SPG7-210ENST00000564409 ARHGEF3Q9NR81 526 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 FBXL5Q9UKA1 691 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 DERAQ9Y315 318 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 MRPS23Q9Y3D9 190 aaKnown RBP16.33■□□□□ 0.2
SPG7-210ENST00000564409 KRBA1A5PL33 1030 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 ZNF197O14709 1029 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 FAM189A1O60320 539 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 RHOP08100 348 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 TXLNAP40222 546 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 AARSP49588 968 aaKnown RBP eCLIP16.32■□□□□ 0.2
SPG7-210ENST00000564409 DHX8Q14562 1220 aaKnown RBP16.32■□□□□ 0.2
SPG7-210ENST00000564409 SEZ6Q53EL9 994 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 PARM1Q6UWI2 310 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 MAP4K3Q8IVH8 894 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 NPAS3Q8IXF0 933 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 DTWD2Q8NBA8 298 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 LEMD2Q8NC56 503 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 ITFG1Q8TB96 612 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 GPR152Q8TDT2 470 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 HVCN1Q96D96 273 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 KIF12Q96FN5 646 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 HAPLN2Q9GZV7 340 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 TBC1D17Q9HA65 648 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 SEL1LQ9UBV2 794 aa16.32■□□□□ 0.2
SPG7-210ENST00000564409 AFF4Q9UHB7 1163 aaKnown RBP16.32■□□□□ 0.2
SPG7-210ENST00000564409 SRPRBQ9Y5M8 271 aaKnown RBP16.32■□□□□ 0.2
SPG7-210ENST00000564409 LACTBL1A8MY62 500 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 PI15O43692 258 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 ECI2O75521 394 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 YWHAHQ04917 246 aaPredicted RBP16.31■□□□□ 0.2
SPG7-210ENST00000564409 PTPAQ15257 358 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
SPG7-210ENST00000564409 USP37Q86T82 979 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 BEST2Q8NFU1 509 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 FGF14Q92915 247 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 MSTO1Q9BUK6 570 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 ZHX3Q9H4I2 956 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 CYP4F11Q9HBI6 524 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 HCFC1R1Q9NWW0 138 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 CA14Q9ULX7 337 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 INSL5Q9Y5Q6 135 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 MIA3Q5JRA6 1907 aa16.31■□□□□ 0.2
SPG7-210ENST00000564409 OR6C75A6NL08 312 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 GFRA3O60609 400 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 GAP43P17677 238 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 TYMPP19971 482 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 SYT1P21579 422 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 TNFSF9P41273 254 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 ARPP19P56211 112 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 STARD6P59095 220 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 PRKCQQ04759 706 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 GRIN1Q05586 938 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 POSTNQ15063 836 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 CYP4A22Q5TCH4 519 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 SPATA1Q5VX52 437 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 IQCEQ6IPM2 695 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 FIZ1Q96SL8 496 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
SPG7-210ENST00000564409 ASB7Q9H672 318 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 FAM86C1Q9NVL1 165 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 CPSF3Q9UKF6 684 aaKnown RBP16.3■□□□□ 0.2
SPG7-210ENST00000564409 SIT1Q9Y3P8 196 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 CLIC4Q9Y696 253 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 STYXL1Q9Y6J8 313 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 ANK1P16157 1881 aa16.3■□□□□ 0.2
SPG7-210ENST00000564409 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
SPG7-210ENST00000564409 CPB1P15086 417 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 GPC5P78333 572 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 ADCY1Q08828 1119 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 PLD1Q13393 1074 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 ANGPT1Q15389 498 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 RRAGBQ5VZM2 374 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 SV2BQ7L1I2 683 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 ZNF720Q7Z2F6 126 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 EPSTI1Q96J88 318 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 ZNF512Q96ME7 567 aaPredicted RBP16.29■□□□□ 0.2
SPG7-210ENST00000564409 RPP25Q9BUL9 199 aaKnown RBP16.29■□□□□ 0.2
SPG7-210ENST00000564409 OSBPL6Q9BZF3 934 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 SEMA4AQ9H3S1 761 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 FBXO2Q9UK22 296 aaPredicted RBP16.29■□□□□ 0.2
SPG7-210ENST00000564409 C2CD2Q9Y426 696 aa16.29■□□□□ 0.2
SPG7-210ENST00000564409 SEC24AO95486 1093 aa16.28■□□□□ 0.2
SPG7-210ENST00000564409 NMT1P30419 496 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms