RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 ANKEF1Q9NU02 776 aa8.07□□□□□ -1.12
VPS4A-203ENST00000564399 C2orf42Q9NWW7 574 aa8.07□□□□□ -1.12
VPS4A-203ENST00000564399 KCNJ14Q9UNX9 436 aa8.07□□□□□ -1.12
VPS4A-203ENST00000564399 USP20Q9Y2K6 914 aa8.07□□□□□ -1.12
VPS4A-203ENST00000564399 INSL5Q9Y5Q6 135 aa8.07□□□□□ -1.12
VPS4A-203ENST00000564399 EML5Q05BV3 1969 aa8.07□□□□□ -1.12
VPS4A-203ENST00000564399 THADAQ6YHU6 1953 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 A0A087WWV3 80 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 TTLL13PA6NNM8 815 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 SPECC1L-ADORA2AF8WAN1 911 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 H7C4K7 107 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 DPYSL4O14531 572 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 CHADO15335 359 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 EPN2O95208 641 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 HOXA6P31267 233 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 CTHP32929 405 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 PXNP49023 591 aaPredicted RBP8.06□□□□□ -1.12
VPS4A-203ENST00000564399 RARRES1P49788 294 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 MLLT6P55198 1093 aaPredicted RBP8.06□□□□□ -1.12
VPS4A-203ENST00000564399 TWF1Q12792 350 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 PON2Q15165 354 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 TEAD2Q15562 447 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 NPY5RQ15761 445 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 MAPK6Q16659 721 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 UPP1Q16831 310 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 FAM187BQ17R55 369 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 CTXN3Q4LDR2 81 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 TXNDC11Q6PKC3 985 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 CPLX2Q6PUV4 134 aaKnown RBP8.06□□□□□ -1.12
VPS4A-203ENST00000564399 CD300LGQ6UXG3 332 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 KBTBD6Q86V97 674 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 RALGPS2Q86X27 583 aaPredicted RBP8.06□□□□□ -1.12
VPS4A-203ENST00000564399 GPIHBP1Q8IV16 184 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 SLFN12Q8IYM2 578 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 LEMD2Q8NC56 503 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 PIGOQ8TEQ8 1089 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 AIFM3Q96NN9 605 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 GPR88Q9GZN0 384 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 C2orf40Q9H1Z8 148 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 FZD8Q9H461 694 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 TRPV4Q9HBA0 871 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 GPRC5CQ9NQ84 441 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 VPS45Q9NRW7 570 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 NUB1Q9Y5A7 615 aa8.06□□□□□ -1.12
VPS4A-203ENST00000564399 ASXL3Q9C0F0 2248 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 ACACAQ13085 2346 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 ARNTLO00327 626 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 GIPC1O14908 333 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 EXTL3O43909 919 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 MOSPD3O75425 235 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 LYPLA2O95372 231 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 ATP2B1P20020 1258 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 SPINK2P20155 84 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 RPS6KB1P23443 525 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 MPLP40238 635 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 RAP1GAPP47736 663 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 ZNF252P-AS1Q0IIN9 211 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 DCAF4L1Q3SXM0 396 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 EEF1DP3Q658K8 133 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 TPGS2Q68CL5 300 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 TCEAL6Q6IPX3 200 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 PIK3AP1Q6ZUJ8 805 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 HAUS6Q7Z4H7 955 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 FAM177A1Q8N128 213 aaPredicted RBP8.05□□□□□ -1.12
VPS4A-203ENST00000564399 SYNPOQ8N3V7 929 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 KDF1Q8NAX2 398 aaPredicted RBP8.05□□□□□ -1.12
VPS4A-203ENST00000564399 C3orf58Q8NDZ4 430 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 MCPH1Q8NEM0 835 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 DEPTORQ8TB45 409 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 SHKBP1Q8TBC3 707 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 TCEAL3Q969E4 200 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 PPP1R10Q96QC0 940 aaKnown RBP8.05□□□□□ -1.12
VPS4A-203ENST00000564399 HSD17B14Q9BPX1 270 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 EDEM2Q9BV94 578 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 GTSE1Q9NYZ3 720 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 CEP72Q9P209 647 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 FBXL5Q9UKA1 691 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 PCDHA12Q9UN75 941 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 SLC8A2Q9UPR5 921 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 PCDHGA5Q9Y5G8 931 aa8.05□□□□□ -1.12
VPS4A-203ENST00000564399 NCANO14594 1321 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 SMIM28A0A1B0GU29 152 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 A0A1W2PRU2 124 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 MYBPHLA2RUH7 354 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 TMEM8BA6NDV4 472 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 C4orf47A7E2U8 309 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 SOBPA7XYQ1 873 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 ACKR2O00590 384 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 PODXLO00592 558 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 SYN3O14994 580 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 CPB1P15086 417 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 XBP1P17861 261 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 PSMA5P28066 241 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 YARSP54577 528 aaKnown RBP8.04□□□□□ -1.12
VPS4A-203ENST00000564399 CREB5Q02930 508 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 SOX4Q06945 474 aaPredicted RBP8.04□□□□□ -1.12
VPS4A-203ENST00000564399 FCHO2Q0JRZ9 810 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 STK3Q13188 491 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 ARHGAP29Q52LW3 1261 aa8.04□□□□□ -1.12
VPS4A-203ENST00000564399 WDR44Q5JSH3 913 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms