RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PDIA4P13667 645 aaKnown RBP21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 ADSSP30520 456 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 HOXA9P31269 272 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 ARPP19P56211 112 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 NTHL1P78549 312 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 SLFN12LQ6IEE8 588 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 SLC8B1Q6J4K2 584 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 BMP8AQ7Z5Y6 402 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 GRASPQ7Z6J2 395 aaPredicted RBP21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 UBALD2Q8IYN6 164 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 POMGNT1Q8WZA1 660 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 MFSD14AQ96MC6 490 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 ACCSQ96QU6 501 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 OLFML3Q9NRN5 406 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 FBXL5Q9UKA1 691 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 AGO2Q9UKV8 859 aaKnown RBP21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 PCDHB8Q9UN66 801 aa21.7■■□□□ 1.06
SHCBP1-203ENST00000564272 WDR27A2RRH5 827 aa21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 H7C4K7 107 aa21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 XPOTO43592 962 aaKnown RBP21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 TBC1D4O60343 1298 aa21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 MRPL58Q14197 206 aaKnown RBP21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 CTXN3Q4LDR2 81 aa21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 KCNG4Q8TDN1 519 aa21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 TNMDQ9H2S6 317 aa21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 POLIQ9UNA4 740 aa21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 EXOC7Q9UPT5 735 aa21.69■■□□□ 1.06
SHCBP1-203ENST00000564272 PDGFBP01127 241 aaPredicted RBP21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 FSHRP23945 695 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 DNM1Q05193 864 aaKnown RBP21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 TMEM132DQ14C87 1099 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 SPATA1Q5VX52 437 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 ZNF280DQ6N043 979 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 CRELD2Q6UXH1 353 aaPredicted RBP21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 CD302Q8IX05 232 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 APPL2Q8NEU8 664 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 BEST2Q8NFU1 509 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 HPS3Q969F9 1004 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 TSPAN18Q96SJ8 248 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 KCNK12Q9HB15 430 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 KBTBD4Q9NVX7 518 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 EPS15L1Q9UBC2 864 aa21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.68■■□□□ 1.06
SHCBP1-203ENST00000564272 M0QZQ0 153 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 XYLBO75191 536 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 ME1P48163 572 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 AARSP49588 968 aaKnown RBP eCLIP21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 CCDC65Q8IXS2 484 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 FBXL6Q8N531 539 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 GLIS3Q8NEA6 775 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 ZSWIM2Q8NEG5 633 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 ZNF461Q8TAF7 563 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 RSAD2Q8WXG1 361 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 SAAL1Q96ER3 474 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 TRIM9Q9C026 710 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 CUEDC2Q9H467 287 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 HCFC1R1Q9NWW0 138 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 PCDHA7Q9UN72 937 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 PCDHB13Q9Y5F0 798 aa21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 TIMM13Q9Y5L4 95 aaPredicted RBP21.67■■□□□ 1.06
SHCBP1-203ENST00000564272 KMT2EQ8IZD2 1858 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 MUC6Q6W4X9 2439 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 ZDBF2Q9HCK1 2354 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 PRPF6O94906 941 aaKnown RBP21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 ABLIM3O94929 683 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 PLA2G5P39877 138 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 ASIC1P78348 528 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 TDGQ13569 410 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 ALCAMQ13740 583 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 UVSSAQ2YD98 709 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 C9orf57Q5W0N0 161 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 SUGP1Q8IWZ8 645 aaKnown RBP21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 SYCP3Q8IZU3 236 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 IQUBQ8NA54 791 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 ST13P5Q8NFI4 369 aaPredicted RBP21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 ASB7Q9H672 318 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 DERAQ9Y315 318 aa21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 ARIH1Q9Y4X5 557 aaPredicted RBP21.66■■□□□ 1.06
SHCBP1-203ENST00000564272 TSC2P49815 1807 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 SEC24AO95486 1093 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 POU2F2P09086 479 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 VCPP55072 806 aaKnown RBP21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 WNT7BP56706 349 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 POSTNQ15063 836 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 ATL3Q6DD88 541 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 DSTYKQ6XUX3 929 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 EFCAB13Q8IY85 973 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 FAM122AQ96E09 287 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 CBWD1Q9BRT8 395 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 FAM213AQ9BRX8 229 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 LRRC27Q9C0I9 530 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 IGSF9Q9P2J2 1179 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 DNMT3BQ9UBC3 853 aaKnown RBP21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 C2CD2Q9Y426 696 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 NOTCH4Q99466 2003 aa21.65■■□□□ 1.06
SHCBP1-203ENST00000564272 PRRG1O14668 218 aa21.64■■□□□ 1.05
SHCBP1-203ENST00000564272 SPTLC1O15269 473 aa21.64■■□□□ 1.05
SHCBP1-203ENST00000564272 POLR2DO15514 142 aaKnown RBP21.64■■□□□ 1.05
SHCBP1-203ENST00000564272 NARSO43776 548 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms