RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 SUSD3Q96L08 255 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 TBC1D32Q96NH3 1257 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 RUSC1Q9BVN2 902 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 AFF4Q9UHB7 1163 aaKnown RBP22.82■■□□□ 1.24
HERC2-204ENST00000563945 NDRG2Q9UN36 371 aaKnown RBP22.82■■□□□ 1.24
HERC2-204ENST00000563945 PCDHB6Q9Y5E3 794 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 OTOGLQ3ZCN5 2332 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 NOTCH4Q99466 2003 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 SEC24AO95486 1093 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 PROZP22891 400 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 U2AF2P26368 475 aaKnown RBP eCLIP22.81■■□□□ 1.24
HERC2-204ENST00000563945 CDC25AP30304 524 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 MRPL58Q14197 206 aaKnown RBP22.81■■□□□ 1.24
HERC2-204ENST00000563945 GRM2Q14416 872 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 PPP2R5DQ14738 602 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 NOLC1Q14978 699 aaKnown RBP eCLIP22.81■■□□□ 1.24
HERC2-204ENST00000563945 FAM78AQ5JUQ0 283 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 C1orf186Q6ZWK4 172 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 TAS1R3Q7RTX0 852 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 LEMD2Q8NC56 503 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 DDX12PQ92771 950 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 TCEAL4Q96EI5 215 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 ZBTB45Q96K62 511 aaPredicted RBP22.81■■□□□ 1.24
HERC2-204ENST00000563945 NTPCRQ9BSD7 190 aaKnown RBP22.81■■□□□ 1.24
HERC2-204ENST00000563945 KIF3AQ9Y496 699 aa22.81■■□□□ 1.24
HERC2-204ENST00000563945 PP2D1A8MPX8 630 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 CLDN3O15551 220 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 TBC1D4O60343 1298 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 TOM1L1O75674 476 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 MYL4P12829 197 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 PRPHP41219 470 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 RAD51AP2Q09MP3 1159 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 TWF1Q12792 350 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 PRSS36Q5K4E3 855 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 SPIRE2Q8WWL2 714 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 BICD1Q96G01 975 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 CDK5RAP3Q96JB5 506 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 SLITRK6Q9H5Y7 841 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 ASAH2Q9NR71 780 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 PCDHB8Q9UN66 801 aa22.8■■□□□ 1.24
HERC2-204ENST00000563945 FANCMQ8IYD8 2048 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 SEC24BO95487 1268 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 PSMC3P17980 439 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 SDHBP21912 280 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 GUCY2CP25092 1073 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 GDI1P31150 447 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 TOB1P50616 345 aaPredicted RBP22.79■■□□□ 1.24
HERC2-204ENST00000563945 NRLP54845 237 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 MCTP1Q6DN14 999 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 USP37Q86T82 979 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 SMARCD2Q92925 531 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 ASB16Q96NS5 453 aa22.79■■□□□ 1.24
HERC2-204ENST00000563945 FAM126AQ9BYI3 521 aaPredicted RBP22.79■■□□□ 1.24
HERC2-204ENST00000563945 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.79■■□□□ 1.24
HERC2-204ENST00000563945 H0YCG3 227 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 ZNF263O14978 683 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 PLS3P13797 630 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 MAPK7Q13164 816 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 SLC10A6Q3KNW5 377 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 SEZ6Q53EL9 994 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 TSSK4Q6SA08 328 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 ZPBP2Q6X784 338 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 YAF2Q8IY57 180 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 HS6ST3Q8IZP7 471 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 ZBTB44Q8NCP5 570 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 DEPDC1BQ8WUY9 529 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 KIF12Q96FN5 646 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 OXCT2Q9BYC2 517 aaPredicted RBP22.78■■□□□ 1.24
HERC2-204ENST00000563945 GPR88Q9GZN0 384 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 PLEKHA5Q9HAU0 1116 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 RAB23Q9ULC3 237 aa22.78■■□□□ 1.24
HERC2-204ENST00000563945 CITO14578 2027 aa22.77■■□□□ 1.24
HERC2-204ENST00000563945 CACNA1AO00555 2505 aa22.77■■□□□ 1.24
HERC2-204ENST00000563945 XPOTO43592 962 aaKnown RBP22.77■■□□□ 1.24
HERC2-204ENST00000563945 CLTAP09496 248 aa22.77■■□□□ 1.24
HERC2-204ENST00000563945 YWHAHQ04917 246 aaPredicted RBP22.77■■□□□ 1.24
HERC2-204ENST00000563945 PLD1Q13393 1074 aa22.77■■□□□ 1.24
HERC2-204ENST00000563945 RSPO4Q2I0M5 234 aaPredicted RBP22.77■■□□□ 1.24
HERC2-204ENST00000563945 DSTYKQ6XUX3 929 aa22.77■■□□□ 1.24
HERC2-204ENST00000563945 KCTD17Q8N5Z5 321 aa22.77■■□□□ 1.24
HERC2-204ENST00000563945 FAM3CQ92520 227 aa22.77■■□□□ 1.24
HERC2-204ENST00000563945 CEP72Q9P209 647 aa22.77■■□□□ 1.24
HERC2-204ENST00000563945 LARSQ9P2J5 1176 aaKnown RBP22.77■■□□□ 1.24
HERC2-204ENST00000563945 SMG5Q9UPR3 1016 aaKnown RBP22.77■■□□□ 1.24
HERC2-204ENST00000563945 ABLIM1O14639 778 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 FCARP24071 287 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 CCR2P41597 374 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 EPHB3P54753 998 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 MTAPQ13126 283 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 KYAT1Q16773 422 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 RNF19BQ6ZMZ0 732 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 KCNK18Q7Z418 384 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 TMEM161BQ8NDZ6 487 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 ZSCAN18Q8TBC5 510 aaPredicted RBP22.76■■□□□ 1.23
HERC2-204ENST00000563945 CSGALNACT1Q8TDX6 532 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 E2F7Q96AV8 911 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 PLIN2Q99541 437 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 LMAN1LQ9HAT1 526 aa22.76■■□□□ 1.23
HERC2-204ENST00000563945 ZNF334Q9HCZ1 680 aaPredicted RBP22.76■■□□□ 1.23
HERC2-204ENST00000563945 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms