RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 C19orf48Q6RUI8 117 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 RALGPS2Q86X27 583 aaPredicted RBP17.55■□□□□ 0.4
RNF40-205ENST00000563909 CCDC83Q8IWF9 413 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 TMX3Q96JJ7 454 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 LLPHQ9BRT6 129 aaKnown RBP17.55■□□□□ 0.4
RNF40-205ENST00000563909 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
RNF40-205ENST00000563909 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 A0A1B0GUA9 196 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 LNP1A1A4G5 178 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 CHADO15335 359 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 DKC1O60832 514 aaKnown RBP eCLIP17.54■□□□□ 0.4
RNF40-205ENST00000563909 CTDNEP1O95476 244 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 TKTP29401 623 aaKnown RBP17.54■□□□□ 0.4
RNF40-205ENST00000563909 CTHP32929 405 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 TFDP1Q14186 410 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 ANKS3Q6ZW76 656 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 PDZD3Q86UT5 571 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 HS6ST3Q8IZP7 471 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 TBCKQ8TEA7 893 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 WASF1Q92558 559 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 SNX21Q969T3 373 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 RSPRY1Q96DX4 576 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 DUSP15Q9H1R2 295 aaPredicted RBP17.54■□□□□ 0.4
RNF40-205ENST00000563909 CXCL16Q9H2A7 254 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 CYP4F11Q9HBI6 524 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 TMEM9BQ9NQ34 198 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 WRAP73Q9P2S5 460 aaPredicted RBP17.54■□□□□ 0.4
RNF40-205ENST00000563909 KLK13Q9UKR3 277 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 MSRB2Q9Y3D2 182 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 VWA8A3KMH1 1905 aa17.54■□□□□ 0.4
RNF40-205ENST00000563909 MOSPD3O75425 235 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 ABLIM3O94929 683 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 TDP2O95551 362 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 MYL4P12829 197 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 ARPP19P56211 112 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 ROR1Q01973 937 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 ST3GAL1Q11201 340 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 ELF2Q15723 593 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 NAB2Q15742 525 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 IQCEQ6IPM2 695 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 PKN3Q6P5Z2 889 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 IFNLR1Q8IU57 520 aaPredicted RBP17.53■□□□□ 0.4
RNF40-205ENST00000563909 TCEAL8Q8IYN2 117 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 NSUN7Q8NE18 718 aaKnown RBP17.53■□□□□ 0.4
RNF40-205ENST00000563909 E2F7Q96AV8 911 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 MTRQ99707 1265 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 SLITRK6Q9H5Y7 841 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 ORC3Q9UBD5 711 aaPredicted RBP17.53■□□□□ 0.4
RNF40-205ENST00000563909 SLC8A2Q9UPR5 921 aa17.53■□□□□ 0.4
RNF40-205ENST00000563909 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.4
RNF40-205ENST00000563909 I3L4J1 428 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 B3GAT3O94766 335 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 SEC24AO95486 1093 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 YWHABP31946 246 aaKnown RBP17.52■□□□□ 0.4
RNF40-205ENST00000563909 NLRP5P59047 1200 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 POU5F1BQ06416 359 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 FCHO2Q0JRZ9 810 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 TEAD2Q15562 447 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 XKR9Q5GH70 373 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 OTUD6AQ7L8S5 288 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 GPIHBP1Q8IV16 184 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 ELMOD1Q8N336 334 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 DEFB124Q8NES8 71 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 ETNPPLQ8TBG4 499 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 DDX27Q96GQ7 796 aaKnown RBP17.52■□□□□ 0.4
RNF40-205ENST00000563909 ZNF512Q96ME7 567 aaPredicted RBP17.52■□□□□ 0.4
RNF40-205ENST00000563909 SH3GLB2Q9NR46 395 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 SNTG2Q9NY99 539 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 GTSE1Q9NYZ3 720 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 GPSM3Q9Y4H4 160 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 INSL5Q9Y5Q6 135 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 ADAMTS20P59510 1910 aa17.52■□□□□ 0.4
RNF40-205ENST00000563909 CYP3A7-CYP3A51PA0A087WV96 503 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 BCLAF3A2AJT9 711 aaKnown RBP17.51■□□□□ 0.39
RNF40-205ENST00000563909 RHOBTB1O94844 696 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 ATF2P15336 505 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 XBP1P17861 261 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 CYP3A7P24462 503 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
RNF40-205ENST00000563909 CAPSQ13938 189 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 UAP1L1Q3KQV9 507 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 SLC8B1Q6J4K2 584 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 FAM177A1Q8N128 213 aaPredicted RBP17.51■□□□□ 0.39
RNF40-205ENST00000563909 ZFYVE19Q96K21 471 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 ANKFY1Q9P2R3 1169 aa17.51■□□□□ 0.39
RNF40-205ENST00000563909 K7ELQ4 463 aaPredicted RBP17.5■□□□□ 0.39
RNF40-205ENST00000563909 ZBTB39O15060 712 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 DCLK1O15075 740 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 TRAPPC3O43617 180 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 P4HBP07237 508 aaKnown RBP17.5■□□□□ 0.39
RNF40-205ENST00000563909 PROSER1Q86XN7 944 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 ASAP3Q8TDY4 903 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 GPR88Q9GZN0 384 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 XPNPEP1Q9NQW7 623 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 ASAH2Q9NR71 780 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 CEP72Q9P209 647 aa17.5■□□□□ 0.39
RNF40-205ENST00000563909 TMEM189-UBE2V1I3L0A0 370 aa17.49■□□□□ 0.39
RNF40-205ENST00000563909 CDX4O14627 284 aaPredicted RBP17.49■□□□□ 0.39
RNF40-205ENST00000563909 KHNYNO15037 678 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms