RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TMEM130Q8N3G9 435 aa23.57■■□□□ 1.36
LINC01960-201ENST00000563759 ANKLE1Q8NAG6 615 aa23.57■■□□□ 1.36
LINC01960-201ENST00000563759 C16orf45Q96MC5 204 aaPredicted RBP23.57■■□□□ 1.36
LINC01960-201ENST00000563759 XYLT2Q9H1B5 865 aa23.57■■□□□ 1.36
LINC01960-201ENST00000563759 TUBGCP4Q9UGJ1 667 aa23.57■■□□□ 1.36
LINC01960-201ENST00000563759 UBQLN1Q9UMX0 589 aaKnown RBP23.57■■□□□ 1.36
LINC01960-201ENST00000563759 GOLGA6L9A6NEM1 432 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 DCDC2CA8MYV0 355 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 XPOTO43592 962 aaKnown RBP23.56■■□□□ 1.36
LINC01960-201ENST00000563759 IBSPP21815 317 aaPredicted RBP23.56■■□□□ 1.36
LINC01960-201ENST00000563759 CYP27A1Q02318 531 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 GFPT1Q06210 699 aaPredicted RBP23.56■■□□□ 1.36
LINC01960-201ENST00000563759 DSC3Q14574 896 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 ASTE1Q2TB18 679 aaPredicted RBP23.56■■□□□ 1.36
LINC01960-201ENST00000563759 JAKMIP2Q96AA8 810 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 TSPAN18Q96SJ8 248 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 TRAIPQ9BWF2 469 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 RNF19AQ9NV58 838 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 AGAP1Q9UPQ3 857 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 SMIM28A0A1B0GU29 152 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 ATICP31939 592 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 RBP5P82980 135 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 TRIM60Q495X7 471 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 ZNF667Q5HYK9 610 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 SCARA5Q6ZMJ2 495 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 CXorf38Q8TB03 319 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 ADAMTS1Q9UHI8 967 aa23.56■■□□□ 1.36
LINC01960-201ENST00000563759 REXO2Q9Y3B8 237 aaKnown RBP23.56■■□□□ 1.36
LINC01960-201ENST00000563759 TET1Q8NFU7 2136 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 CYP26A1O43174 497 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 COL6A1P12109 1028 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 KCNE1P15382 129 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 ANXA13P27216 316 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 SLC18A3Q16572 532 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 XKR4Q5GH76 650 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 KIAA1328Q86T90 577 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 REXO1L1PQ8IX06 675 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 RNF169Q8NCN4 708 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 LPPQ93052 612 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 C18orf25Q96B23 403 aaPredicted RBP23.55■■□□□ 1.36
LINC01960-201ENST00000563759 ZFP42Q96MM3 310 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 RPS6KC1Q96S38 1066 aa23.55■■□□□ 1.36
LINC01960-201ENST00000563759 NXF1Q9UBU9 619 aaKnown RBP23.55■■□□□ 1.36
LINC01960-201ENST00000563759 MEIS3P2A8K0S8 358 aa23.54■■□□□ 1.36
LINC01960-201ENST00000563759 LCA5LO95447 670 aa23.54■■□□□ 1.36
LINC01960-201ENST00000563759 SKIP12755 728 aa23.54■■□□□ 1.36
LINC01960-201ENST00000563759 MLH1P40692 756 aa23.54■■□□□ 1.36
LINC01960-201ENST00000563759 ZBTB6Q15916 424 aa23.54■■□□□ 1.36
LINC01960-201ENST00000563759 WDR72Q3MJ13 1102 aa23.54■■□□□ 1.36
LINC01960-201ENST00000563759 HPDLQ96IR7 371 aa23.54■■□□□ 1.36
LINC01960-201ENST00000563759 LZTFL1Q9NQ48 299 aa23.54■■□□□ 1.36
LINC01960-201ENST00000563759 A0A0U1RQF3 1178 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 ZNF263O14978 683 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 PDE6CP51160 858 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 ARHGAP29Q52LW3 1261 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 C1orf53Q5VUE5 145 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 TMEM106CQ9BVX2 250 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 HIPK3Q9H422 1215 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 PCDHB4Q9Y5E5 795 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 A0A087X0T9 212 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 ZNF623O75123 536 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 FAM228BP0C875 321 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 P4HA1P13674 534 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 ASPAP45381 313 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 TLE2Q04725 743 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 MYO1EQ12965 1108 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 BMS1Q14692 1282 aaKnown RBP23.53■■□□□ 1.36
LINC01960-201ENST00000563759 PTPN14Q15678 1187 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 TMEM270Q6UE05 265 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 MRPL10Q7Z7H8 261 aaKnown RBP23.53■■□□□ 1.36
LINC01960-201ENST00000563759 EPS8L1Q8TE68 723 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 PGBD4Q96DM1 585 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 TOX2Q96NM4 488 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 C11orf49Q9H6J7 331 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 LUC7LQ9NQ29 371 aaKnown RBP23.53■■□□□ 1.36
LINC01960-201ENST00000563759 SEPT11Q9NVA2 429 aaKnown RBP23.53■■□□□ 1.36
LINC01960-201ENST00000563759 ATP11BQ9Y2G3 1177 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 GIT1Q9Y2X7 761 aa23.53■■□□□ 1.36
LINC01960-201ENST00000563759 CLCN1P35523 988 aa23.52■■□□□ 1.36
LINC01960-201ENST00000563759 FAAP100Q0VG06 881 aa23.52■■□□□ 1.36
LINC01960-201ENST00000563759 SLC47A2Q86VL8 602 aa23.52■■□□□ 1.36
LINC01960-201ENST00000563759 GAD1Q99259 594 aa23.52■■□□□ 1.36
LINC01960-201ENST00000563759 FTHL17Q9BXU8 183 aa23.52■■□□□ 1.36
LINC01960-201ENST00000563759 VRTNQ9H8Y1 702 aa23.52■■□□□ 1.36
LINC01960-201ENST00000563759 POLIQ9UNA4 740 aa23.52■■□□□ 1.36
LINC01960-201ENST00000563759 A0A0U1RQJ8 604 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 PTGESO14684 152 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 NBNO60934 754 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 CD58P19256 250 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 ACO1P21399 889 aaKnown RBP23.51■■□□□ 1.35
LINC01960-201ENST00000563759 DNTTIP2Q5QJE6 756 aaKnown RBP23.51■■□□□ 1.35
LINC01960-201ENST00000563759 SLC20A1Q8WUM9 679 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 ATRIPQ8WXE1 791 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 PAWRQ96IZ0 340 aaKnown RBP23.51■■□□□ 1.35
LINC01960-201ENST00000563759 RGS18Q9NS28 235 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 PCDHA13Q9Y5I0 950 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 VAV2P52735 878 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 YWHAEP62258 255 aaKnown RBP23.51■■□□□ 1.35
LINC01960-201ENST00000563759 TNNC1P63316 161 aa23.51■■□□□ 1.35
LINC01960-201ENST00000563759 AGMOQ6ZNB7 445 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms