RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 FAM78AQ5JUQ0 283 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 HYIQ5T013 277 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 ERMP1Q7Z2K6 904 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 HS6ST3Q8IZP7 471 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 SPIRE2Q8WWL2 714 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 DDX12PQ92771 950 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 CLDN23Q96B33 292 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 ELSPBP1Q96BH3 223 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 TBC1D32Q96NH3 1257 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 PLIN2Q99541 437 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 ANKFY1Q9P2R3 1169 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 NUB1Q9Y5A7 615 aa18.36■□□□□ 0.53
HDGFL3-203ENST00000563404 CITO14578 2027 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 NPHP3-ACAD11A0A0J9YXS1 232 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 TOM1L1O75674 476 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 MAPTP10636 758 aaKnown RBP18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 PLS3P13797 630 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 SPAG1Q07617 926 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 GRM2Q14416 872 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 NOLC1Q14978 699 aaKnown RBP eCLIP18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 ZRSR1Q15695 479 aaKnown RBP18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 ZNF528Q3MIS6 628 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 CTXN3Q4LDR2 81 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 ZNF687Q8N1G0 1237 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 ZSWIM3Q96MP5 696 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 TIPINQ9BVW5 301 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 CEP72Q9P209 647 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 FBXO4Q9UKT5 387 aa18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 PDCD11Q14690 1871 aaKnown RBP18.35■□□□□ 0.53
HDGFL3-203ENST00000563404 LAMTOR5O43504 91 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 VNN2O95498 520 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 CXCL8P10145 99 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 MCM4P33991 863 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 SLC12A3P55017 1021 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 ATP2C1P98194 919 aaPredicted RBP18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 CSTF1Q05048 431 aaKnown RBP18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 MCL1Q07820 350 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 ADCY1Q08828 1119 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 ZBTB41Q5SVQ8 909 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 TPGS2Q68CL5 300 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 RNF19BQ6ZMZ0 732 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 SYT2Q8N9I0 419 aaPredicted RBP18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 RUBCNQ92622 972 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 ASB16Q96NS5 453 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 AFF4Q9UHB7 1163 aaKnown RBP18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 PCDHB8Q9UN66 801 aa18.34■□□□□ 0.53
HDGFL3-203ENST00000563404 NCANO14594 1321 aa18.33■□□□□ 0.53
HDGFL3-203ENST00000563404 MICAL2O94851 1124 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 GJA1P17302 382 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 TWF1Q12792 350 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 STRN3Q13033 797 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 ARSHQ5FYA8 562 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 ZNF280DQ6N043 979 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 ZNF852Q6ZMS4 543 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 PDZD4Q76G19 769 aaPredicted RBP18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 LRRC15Q8TF66 581 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 NELL1Q92832 810 aa18.33■□□□□ 0.52
HDGFL3-203ENST00000563404 COL4A2P08572 1712 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 TTC26A0AVF1 554 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 M0QZQ0 153 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 ZNF197O14709 1029 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 KINO60870 393 aaKnown RBP18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 PLA2G4BP0C869 781 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 TNFSF9P41273 254 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 MAGEA9P43362 315 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 ZBTB6Q15916 424 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 C8orf34Q49A92 452 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 TMEM119Q4V9L6 283 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 MCTP1Q6DN14 999 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 TSSK4Q6SA08 328 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 VITQ6UXI7 678 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 ZPBP2Q6X784 338 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 APPL2Q8NEU8 664 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 BEST2Q8NFU1 509 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 DNASE1L2Q92874 299 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 NELL2Q99435 816 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 HINFPQ9BQA5 517 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 CRISPLD1Q9H336 500 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 ZFP14Q9HCL3 533 aa18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 TIMM13Q9Y5L4 95 aaPredicted RBP18.32■□□□□ 0.52
HDGFL3-203ENST00000563404 VWA3AA6NCI4 1184 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 CLDN3O15551 220 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 OR4Q2P0C623 313 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 LRPAP1P30533 357 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 VIPR2P41587 438 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 RPS9P46781 194 aaKnown RBP18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 SMTNP53814 917 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 EPHA5P54756 1037 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 NCKAP1LP55160 1127 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 RILPL1Q5EBL4 403 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 CYP4A22Q5TCH4 519 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 MAP4K3Q8IVH8 894 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 ZBTB44Q8NCP5 570 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 PRMT8Q9NR22 394 aaPredicted RBP18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 PCDHGA2Q9Y5H1 932 aa18.31■□□□□ 0.52
HDGFL3-203ENST00000563404 FAM189A1O60320 539 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 LILRB5O75023 590 aa18.3■□□□□ 0.52
HDGFL3-203ENST00000563404 OAZ2O95190 189 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms