RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PTTG2Q9NZH5 202 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 EHD3Q9NZN3 535 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 GMEB2Q9UKD1 530 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 CACNG2Q9Y698 323 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 IQGAP1P46940 1657 aa9.92□□□□□ -0.82
CDH1-205ENST00000562836 TCHHQ07283 1943 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 LMTK2Q8IWU2 1503 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 C1orf232A0A0U1RR37 186 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 ENC1O14682 589 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 TLR3O15455 904 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 ECE2O60344 883 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 TCEA3O75764 348 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 CALB2P22676 271 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 MSH2P43246 934 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 SLC9A3P48764 834 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 AK2P54819 239 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 HADHBP55084 474 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 EIF4A1P60842 406 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 NONOQ15233 471 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDH1-205ENST00000562836 AARDQ4LEZ3 155 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 GRTP1Q5TC63 336 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 IYDQ6PHW0 289 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 BEND4Q6ZU67 534 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 CCDC36Q8IYA8 594 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 KIF2BQ8N4N8 673 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 PBXIP1Q96AQ6 731 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 OMA1Q96E52 524 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 GAL3ST1Q99999 423 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 CDH19Q9H159 772 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 EPS8L2Q9H6S3 715 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 BRD9Q9H8M2 597 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 AFF4Q9UHB7 1163 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 POU2F3Q9UKI9 436 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 SAMD9LQ8IVG5 1584 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 NPATQ14207 1427 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 E7ENQ6 273 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 PSMD11O00231 422 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 BMP10O95393 424 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 EPB41P11171 864 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 CSTF2P33240 577 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDH1-205ENST00000562836 RFC4P35249 363 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 SF3A3Q12874 501 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDH1-205ENST00000562836 KARSQ15046 597 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 PON2Q15165 354 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 NFIL3Q16649 462 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 FUT11Q495W5 492 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 FYB2Q5VWT5 728 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 SLC4A10Q6U841 1118 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 OTOP3Q7RTS5 596 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 RTKN2Q8IZC4 609 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 ANKRD42Q8N9B4 389 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 RBBP8NLQ8NC74 664 aaPredicted RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 ANGPTL6Q8NI99 470 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 ACTRT2Q8TDY3 377 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 ANKS1AQ92625 1134 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 RRP36Q96EU6 259 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 NUSAP1Q9BXS6 441 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 FRMD8Q9BZ67 464 aaPredicted RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 CAAP1Q9H8G2 361 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 SAGE1Q9NXZ1 904 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 RABGEF1Q9UJ41 708 aa9.91□□□□□ -0.82
CDH1-205ENST00000562836 SMG5Q9UPR3 1016 aaKnown RBP9.91□□□□□ -0.82
CDH1-205ENST00000562836 TTC21BQ7Z4L5 1316 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 SH3D21A4FU49 640 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 A8MU76 341 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 hCG_2039718K7EN88 272 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 WNT7AO00755 349 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 F13A1P00488 732 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 PRKCAP17252 672 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 CDH3P22223 829 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 GRK2P25098 689 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 POU6F2P78424 691 aaPredicted RBP9.9□□□□□ -0.82
CDH1-205ENST00000562836 DNAJC3Q13217 504 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 PPA1Q15181 289 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 ARSHQ5FYA8 562 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 CLEC2AQ6UVW9 174 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 MARK2Q7KZI7 788 aaKnown RBP9.9□□□□□ -0.82
CDH1-205ENST00000562836 GPR141Q7Z602 305 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 ZNF366Q8N895 744 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 ATP6V1G3Q96LB4 118 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 HS6ST2Q96MM7 605 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 SLC7A8Q9UHI5 535 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 PREX2Q70Z35 1606 aa9.9□□□□□ -0.82
CDH1-205ENST00000562836 CYP3A7-CYP3A51PA0A087WV96 503 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 CACNB4O00305 520 aaPredicted RBP9.9□□□□□ -0.83
CDH1-205ENST00000562836 SLC9A3R1O14745 358 aaPredicted RBP9.9□□□□□ -0.83
CDH1-205ENST00000562836 ZPR1O75312 459 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 OR6B1O95007 311 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 FUCA1P04066 466 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 APOA4P06727 396 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 OCM2P0CE71 109 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 OCMP0CE72 109 aaPredicted RBP9.9□□□□□ -0.83
CDH1-205ENST00000562836 ATF4P18848 351 aaPredicted RBP9.9□□□□□ -0.83
CDH1-205ENST00000562836 NR1D1P20393 614 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 CYP3A7P24462 503 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 SEC13P55735 322 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 TRPC3Q13507 836 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 FAM83BQ5T0W9 1011 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 B3GNT6Q6ZMB0 384 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 ZNF677Q86XU0 584 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms