RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 LEMD2Q8NC56 503 aa18.12■□□□□ 0.49
CMTM3-205ENST00000562707 NELL1Q92832 810 aa18.12■□□□□ 0.49
CMTM3-205ENST00000562707 SMARCD2Q92925 531 aa18.12■□□□□ 0.49
CMTM3-205ENST00000562707 C18orf25Q96B23 403 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-205ENST00000562707 ASB16Q96NS5 453 aa18.12■□□□□ 0.49
CMTM3-205ENST00000562707 TIPINQ9BVW5 301 aa18.12■□□□□ 0.49
CMTM3-205ENST00000562707 EPC1Q9H2F5 836 aa18.12■□□□□ 0.49
CMTM3-205ENST00000562707 AFF4Q9UHB7 1163 aaKnown RBP18.12■□□□□ 0.49
CMTM3-205ENST00000562707 SMG5Q9UPR3 1016 aaKnown RBP18.12■□□□□ 0.49
CMTM3-205ENST00000562707 DCHS1Q96JQ0 3298 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 SFI1A8K8P3 1242 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 LAD1O00515 517 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 SLC16A4O15374 487 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 MYL4P12829 197 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 CPB1P15086 417 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 PSMC3P17980 439 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 GDI1P31150 447 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 NRLP54845 237 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 TWF1Q12792 350 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 FZD5Q13467 585 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 RINT1Q6NUQ1 792 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 DTHD1Q6ZMT9 781 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 C1orf186Q6ZWK4 172 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 HS6ST3Q8IZP7 471 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 DEPDC1BQ8WUY9 529 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 DDX12PQ92771 950 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 ZSCAN31Q96LW9 406 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-205ENST00000562707 TBC1D32Q96NH3 1257 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 NTPCRQ9BSD7 190 aaKnown RBP18.11■□□□□ 0.49
CMTM3-205ENST00000562707 RUSC1Q9BVN2 902 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 ZNF334Q9HCZ1 680 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-205ENST00000562707 TRPV5Q9NQA5 729 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 PRMT8Q9NR22 394 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-205ENST00000562707 PCDHB8Q9UN66 801 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 ZNF292O60281 2723 aa18.11■□□□□ 0.49
CMTM3-205ENST00000562707 ABLIM1O14639 778 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 ZNF263O14978 683 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 TOM1L1O75674 476 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 CCR2P41597 374 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 SMTNP53814 917 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 MAPK7Q13164 816 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 SLC10A6Q3KNW5 377 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 FAM3CQ92520 227 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 ZBTB45Q96K62 511 aaPredicted RBP18.1■□□□□ 0.49
CMTM3-205ENST00000562707 ZSWIM3Q96MP5 696 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 IER2Q9BTL4 223 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 GPR88Q9GZN0 384 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 CHRDQ9H2X0 955 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 LMAN1LQ9HAT1 526 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 ASAH2Q9NR71 780 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 CEP72Q9P209 647 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 ANKFY1Q9P2R3 1169 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 PCDHB6Q9Y5E3 794 aa18.1■□□□□ 0.49
CMTM3-205ENST00000562707 SHISA7A6NL88 538 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 PP2D1A8MPX8 630 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 PRR5-ARHGAP8B1AHC4 643 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 CLDN3O15551 220 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 GUCY2CP25092 1073 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 U2AF2P26368 475 aaKnown RBP eCLIP18.09■□□□□ 0.49
CMTM3-205ENST00000562707 CDC25AP30304 524 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 MATR3P43243 847 aaKnown RBP eCLIP18.09■□□□□ 0.49
CMTM3-205ENST00000562707 TOB1P50616 345 aaPredicted RBP18.09■□□□□ 0.49
CMTM3-205ENST00000562707 ARHGAP8P85298 464 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 LMNB2Q03252 620 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 YWHAHQ04917 246 aaPredicted RBP18.09■□□□□ 0.49
CMTM3-205ENST00000562707 NOLC1Q14978 699 aaKnown RBP eCLIP18.09■□□□□ 0.49
CMTM3-205ENST00000562707 ZRSR1Q15695 479 aaKnown RBP18.09■□□□□ 0.49
CMTM3-205ENST00000562707 SEZ6Q53EL9 994 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 VITQ6UXI7 678 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 RNF19BQ6ZMZ0 732 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 MAMSTRQ6ZN01 415 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 MAP4K3Q8IVH8 894 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 SPIRE2Q8WWL2 714 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 E2F7Q96AV8 911 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 OXCT2Q9BYC2 517 aaPredicted RBP18.09■□□□□ 0.49
CMTM3-205ENST00000562707 SLITRK6Q9H5Y7 841 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 GMEB2Q9UKD1 530 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 RAB23Q9ULC3 237 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.09■□□□□ 0.49
CMTM3-205ENST00000562707 PIAS3Q9Y6X2 628 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 COL4A3Q01955 1670 aa18.09■□□□□ 0.49
CMTM3-205ENST00000562707 PLS3P13797 630 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 GJA1P17302 382 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 PRPHP41219 470 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 VIPR2P41587 438 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 EPHA5P54756 1037 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 ZPBP2Q6X784 338 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 MFSD6LQ8IWD5 586 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 YAF2Q8IY57 180 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 ZNF687Q8N1G0 1237 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 ZSCAN18Q8TBC5 510 aaPredicted RBP18.08■□□□□ 0.48
CMTM3-205ENST00000562707 PLEKHA5Q9HAU0 1116 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 TRPV4Q9HBA0 871 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 SH2B1Q9NRF2 756 aaPredicted RBP18.08■□□□□ 0.48
CMTM3-205ENST00000562707 USP18Q9UMW8 372 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 MYH15Q9Y2K3 1946 aa18.08■□□□□ 0.48
CMTM3-205ENST00000562707 MEFVO15553 781 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-205ENST00000562707 MOSPD3O75425 235 aa18.07■□□□□ 0.48
CMTM3-205ENST00000562707 CLTAP09496 248 aa18.07■□□□□ 0.48
CMTM3-205ENST00000562707 CCR3P51677 355 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms