RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 TNMDQ9H2S6 317 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 ZDHHC7Q9NXF8 308 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 RCOR1Q9UKL0 485 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 AGO2Q9UKV8 859 aaKnown RBP12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 UBQLN1Q9UMX0 589 aaKnown RBP12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 NUB1Q9Y5A7 615 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 TIMM13Q9Y5L4 95 aaPredicted RBP12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 BACE2Q9Y5Z0 518 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 CLUHO75153 1309 aa12.06□□□□□ -0.48
LPCAT4-202ENST00000562404 TMEM221A6NGB7 291 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 M0R296 226 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 SYN3O14994 580 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 CCL16O15467 120 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 POLR2DO15514 142 aaKnown RBP12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 TRAPPC3O43617 180 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 ABLIM3O94929 683 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 SEC24AO95486 1093 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 PDGFBP01127 241 aaPredicted RBP12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 CYP3A5P20815 502 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 MCM4P33991 863 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 AARSP49588 968 aaKnown RBP eCLIP12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 SLC8B1Q6J4K2 584 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 ANKS3Q6ZW76 656 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 GRASPQ7Z6J2 395 aaPredicted RBP12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 GRAMD1CQ8IYS0 662 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 SLC7A14Q8TBB6 771 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 KCNG4Q8TDN1 519 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 RSAD2Q8WXG1 361 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 POMGNT1Q8WZA1 660 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 SAAL1Q96ER3 474 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 CBWD1Q9BRT8 395 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 BLZF1Q9H2G9 400 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 HCFC1R1Q9NWW0 138 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 FBXL5Q9UKA1 691 aa12.05□□□□□ -0.48
LPCAT4-202ENST00000562404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 ANO9A1A5B4 782 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 GOLGA8IPA6NC78 632 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 GOLGA8JA6NMD2 632 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 M0QZQ0 153 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 NRG2O14511 850 aaPredicted RBP12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 VNN2O95498 520 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 PDIA4P13667 645 aaKnown RBP12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 ME1P48163 572 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 ARPP19P56211 112 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 EHHADHQ08426 723 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 SIGLEC14Q08ET2 396 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 KYAT1Q16773 422 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 PPM1LQ5SGD2 360 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 C9orf57Q5W0N0 161 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 PDXDC1Q6P996 788 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 ACCSQ96QU6 501 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 C7orf25Q9BPX7 421 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 PCIF1Q9H4Z3 704 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 PIDD1Q9HB75 910 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 DPP7Q9UHL4 492 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 SORCS3Q9UPU3 1222 aa12.04□□□□□ -0.48
LPCAT4-202ENST00000562404 MUC6Q6W4X9 2439 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 COL4A3Q01955 1670 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 PIRO00625 290 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 NARSO43776 548 aaKnown RBP12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 OR4Q2P0C623 313 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 GBP2P32456 591 aaPredicted RBP12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 ABCD1P33897 745 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 AFMP43652 599 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 LILRA4P59901 499 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 ASIC1P78348 528 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 CUL4BQ13620 913 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 TMEM132DQ14C87 1099 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 CTXN3Q4LDR2 81 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 LIN9Q5TKA1 542 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 ATL3Q6DD88 541 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 CYP26C1Q6V0L0 522 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 GET4Q7L5D6 327 aaPredicted RBP12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 EPM2AIP1Q7L775 607 aaPredicted RBP12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 OTOP3Q7RTS5 596 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 CCDC65Q8IXS2 484 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 IQUBQ8NA54 791 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 ZNF461Q8TAF7 563 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 ITFG1Q8TB96 612 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 LEO1Q8WVC0 666 aaPredicted RBP12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 ACSF2Q96CM8 615 aaPredicted RBP12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 TMEM209Q96SK2 561 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 CUEDC2Q9H467 287 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 ASB7Q9H672 318 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 KCNK12Q9HB15 430 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 DNMT3BQ9UBC3 853 aaKnown RBP12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
LPCAT4-202ENST00000562404 A0A1B0GVL5 298 aa12.02□□□□□ -0.49
LPCAT4-202ENST00000562404 TGFB1I1O43294 461 aa12.02□□□□□ -0.49
LPCAT4-202ENST00000562404 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
LPCAT4-202ENST00000562404 KLRC4O43908 158 aa12.02□□□□□ -0.49
LPCAT4-202ENST00000562404 HNRNPA1P09651 372 aaKnown RBP eCLIP12.02□□□□□ -0.49
LPCAT4-202ENST00000562404 GARTP22102 1010 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms