RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 ANO4Q32M45 955 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 LAYNQ6UX15 382 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 SH2D3AQ9BRG2 576 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ZCWPW1Q9H0M4 648 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 IL1RL2Q9HB29 575 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 KIAA1586Q9HCI6 787 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 RAB6BQ9NRW1 208 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 SATB2Q9UPW6 733 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 SNUPNO95149 360 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 KCNA2P16389 499 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 COILP38432 576 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ZNF568Q3ZCX4 644 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 TNS4Q8IZW8 715 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ZC3H15Q8WU90 426 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 AGAP3Q96P47 875 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 DOLKQ9UPQ8 538 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 SLC16A3O15427 465 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ADORA2BP29275 332 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 CDC25CP30307 473 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 QRICH1Q2TAL8 776 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 COBLL1Q53SF7 1204 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 CC2D2BQ6DHV5 1058 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 IFT43Q96FT9 208 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 REEP2Q9BRK0 252 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 SFMBT1Q9UHJ3 866 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 DMGDHQ9UI17 866 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ROBO2Q9HCK4 1378 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 MYO3BQ8WXR4 1341 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 USP42Q9H9J4 1324 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 PID1Q7Z2X4 250 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 CDR2LQ86X02 465 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 GPD1LQ8N335 351 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ULK4Q96C45 1275 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 KDM4CQ9H3R0 1056 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 PAPOLBQ9NRJ5 636 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 RSPH10B2B2RC85 870 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ERVV-1B6SEH8 477 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ZSCAN9O15535 394 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 KLHL2O95198 593 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 RSPH10BP0C881 870 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 RAP1GDS1P52306 607 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ORC2Q13416 577 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 PPP1R18Q6NYC8 613 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 OR9Q1Q8NGQ5 310 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 MCEEQ96PE7 176 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 POLR3FQ9H1D9 316 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 DTNAQ9Y4J8 743 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 UBA6A0AVT1 1052 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 AKR1B1P15121 316 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 FBXW4P57775 412 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 MRPL28Q13084 256 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 DMC1Q14565 340 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 ACBD5Q5T8D3 534 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 POTEAQ6S8J7 498 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 NLRP9Q7RTR0 991 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 ARID3BQ8IVW6 561 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 OR6P1Q8NGX9 317 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 PIGBQ92521 554 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 ASPSCR1Q9BZE9 553 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 EML4Q9HC35 981 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 RBAKQ9NYW8 714 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 WDR47O94967 919 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 ESRRBO95718 433 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 GFAPP14136 432 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 SREBF2Q12772 1141 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 SEMA3FQ13275 785 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 DSTYKQ6XUX3 929 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 ATG9AQ7Z3C6 839 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 TAGAPQ8N103 731 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 E2F7Q96AV8 911 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 CMTM5Q96DZ9 223 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 PACSIN1Q9BY11 444 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 SEL1LQ9UBV2 794 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 TRPM1Q7Z4N2 1603 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 ATP9AO75110 1047 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 SRP72O76094 671 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 KPNB1Q14974 876 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 TRIM72Q6ZMU5 477 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 HAUS6Q7Z4H7 955 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 TPCN2Q8NHX9 752 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 ZNF341Q9BYN7 854 aa10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 CHCHD3Q9NX63 227 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-202ENST00000561623 ZBTB39O15060 712 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 ACTR2P61160 394 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM160B2Q86V87 743 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM129AQ9BZQ8 928 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 PABPC3Q9H361 631 aaKnown RBP10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 RUBCNLQ9H714 662 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 RAVER2Q9HCJ3 691 aaKnown RBP10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM217BQ9NTX9 383 aaPredicted RBP10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 GID8Q9NWU2 228 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 UVRAGQ9P2Y5 699 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 UBE2Q2LH0YL09 131 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 MCPH1Q8NEM0 835 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM111AQ96PZ2 611 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM49AQ9H0Q0 323 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms