RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 C2CD2Q9Y426 696 aa21.59■■□□□ 1.05
TSPAN3-210ENST00000561277 PPEF2O14830 753 aa21.58■■□□□ 1.05
TSPAN3-210ENST00000561277 KIAA0391O15091 583 aaKnown RBP21.58■■□□□ 1.05
TSPAN3-210ENST00000561277 RHOBTB3O94955 611 aa21.58■■□□□ 1.05
TSPAN3-210ENST00000561277 SYCE2Q6PIF2 218 aa21.58■■□□□ 1.05
TSPAN3-210ENST00000561277 CBWD2Q8IUF1 395 aa21.58■■□□□ 1.05
TSPAN3-210ENST00000561277 GPR65Q8IYL9 337 aa21.58■■□□□ 1.05
TSPAN3-210ENST00000561277 USP15Q9Y4E8 981 aaPredicted RBP21.58■■□□□ 1.05
TSPAN3-210ENST00000561277 PLXNA3P51805 1871 aa21.58■■□□□ 1.04
TSPAN3-210ENST00000561277 GLUD1P00367 558 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 TFAMQ00059 246 aaKnown RBP21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 C12orf76Q8N812 135 aaPredicted RBP21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 RDH13Q8NBN7 331 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 FBXL18Q96ME1 805 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 PDE11AQ9HCR9 933 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 DZANK1Q9NVP4 752 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 FNIP2Q9P278 1114 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 ZNF233A6NK53 670 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 SPATA31D3P0C874 917 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 HOXB8P17481 243 aaPredicted RBP21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 C9orf57Q5W0N0 161 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 PDXDC1Q6P996 788 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 SPATA31D4Q6ZUB0 917 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 ERCC4Q92889 916 aaPredicted RBP21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 FAM84AQ96KN4 292 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 SUSD3Q96L08 255 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 CLSTN3Q9BQT9 956 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 MAN1C1Q9NR34 630 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 DPP3Q9NY33 737 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 MAPK8IP1Q9UQF2 711 aa21.57■■□□□ 1.04
TSPAN3-210ENST00000561277 DLL1O00548 723 aa21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 SNRPFP62306 86 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 KCNB1Q14721 858 aa21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 VARS2Q5ST30 1063 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 RARS2Q5T160 578 aaKnown RBP21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 ANKS3Q6ZW76 656 aa21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 XXYLT1Q8NBI6 393 aa21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 KIAA1586Q9HCI6 787 aa21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 MTRRQ9UBK8 725 aa21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 CDH22Q9UJ99 828 aa21.56■■□□□ 1.04
TSPAN3-210ENST00000561277 SYN3O14994 580 aa21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 ADAM12O43184 909 aa21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 TGM5O43548 720 aa21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 KINO60870 393 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 SMAD2Q15796 467 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 SNRNP35Q16560 246 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 LMBRD2Q68DH5 695 aaPredicted RBP21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 DSTYKQ6XUX3 929 aa21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 NT5DC4Q86YG4 428 aa21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 GOLGA5Q8TBA6 731 aa21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 S1PR5Q9H228 398 aa21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 KCTD10Q9H3F6 313 aa21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 CGNQ9P2M7 1197 aaKnown RBP21.55■■□□□ 1.04
TSPAN3-210ENST00000561277 WEE2P0C1S8 567 aa21.54■■□□□ 1.04
TSPAN3-210ENST00000561277 RSPO2Q6UXX9 243 aaPredicted RBP21.54■■□□□ 1.04
TSPAN3-210ENST00000561277 TIGD1Q96MW7 591 aa21.54■■□□□ 1.04
TSPAN3-210ENST00000561277 SFXN1Q9H9B4 322 aa21.54■■□□□ 1.04
TSPAN3-210ENST00000561277 HOOK1Q9UJC3 728 aaKnown RBP21.54■■□□□ 1.04
TSPAN3-210ENST00000561277 PCDHB8Q9UN66 801 aa21.54■■□□□ 1.04
TSPAN3-210ENST00000561277 TIMM13Q9Y5L4 95 aaPredicted RBP21.54■■□□□ 1.04
TSPAN3-210ENST00000561277 CDY1Q9Y6F8 540 aa21.54■■□□□ 1.04
TSPAN3-210ENST00000561277 ANO9A1A5B4 782 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 PIRO00625 290 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 EXOC3O60645 756 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 KIF20AO95235 890 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 TMEM191BP0C7N4 346 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 OR1D2P34982 312 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 LILRA4P59901 499 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 CES5AQ6NT32 575 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 TMC5Q6UXY8 1006 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 C12orf56Q8IXR9 622 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 SMYD4Q8IYR2 804 aaPredicted RBP21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 APPL2Q8NEU8 664 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 FEZF2Q8TBJ5 459 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 CACTINQ8WUQ7 758 aaKnown RBP21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 MTMR12Q9C0I1 747 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 RMND1Q9NWS8 449 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 TTC28Q96AY4 2481 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 PTPRJQ12913 1337 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 SPTLC1O15269 473 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 SMC2O95347 1197 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 ITGB3P05106 788 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 AARSP49588 968 aaKnown RBP eCLIP21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 CBX2Q14781 532 aaPredicted RBP21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 ELMSAN1Q6PJG2 1045 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 C1orf127Q8N9H9 656 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 ADAM7Q9H2U9 754 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 BACE2Q9Y5Z0 518 aa21.53■■□□□ 1.04
TSPAN3-210ENST00000561277 M0QZQ0 153 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 PDXKO00764 312 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 PRPF40AO75400 957 aaKnown RBP21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 DLATP10515 647 aaKnown RBP21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 POLR2BP30876 1174 aaKnown RBP21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 TAF6P49848 677 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 ARPP19P56211 112 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 UBE2HP62256 183 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 ITIH3Q06033 890 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 CTXN3Q4LDR2 81 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 LILRA6Q6PI73 481 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 KREMEN2Q8NCW0 462 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms