RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TRAK2O60296 914 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 FAM189A1O60320 539 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 FAM13AO94988 1023 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 SEC24AO95486 1093 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 PIGRP01833 764 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 LRG1P02750 347 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 PTPN2P17706 415 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 LRPAP1P30533 357 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 TNFSF9P41273 254 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 CUL4AQ13619 759 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 ANGPT1Q15389 498 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 SLC5A9Q2M3M2 681 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 RASSF8Q8NHQ8 419 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 ING5Q8WYH8 240 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 KIF12Q96FN5 646 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 CYP4F11Q9HBI6 524 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 GDE1Q9NZC3 331 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 SIT1Q9Y3P8 196 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 LACTBL1A8MY62 500 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 K7ENM7 598 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 M0QZQ0 153 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 KRT18P05783 430 aaKnown RBP17.66■□□□□ 0.42
SNX1-213ENST00000561026 CYP3A5P20815 502 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 MARCKSP29966 332 aaPredicted RBP17.66■□□□□ 0.42
SNX1-213ENST00000561026 STARD6P59095 220 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 PPP2R3AQ06190 1150 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 ZBTB41Q5SVQ8 909 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 ZNF280DQ6N043 979 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 ASCL5Q7RTU5 278 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 FRMD5Q7Z6J6 570 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 TMEM130Q8N3G9 435 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 SHDQ96IW2 340 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 TSPAN18Q96SJ8 248 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 CCSER1Q9C0I3 900 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 MAFFQ9ULX9 164 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 UBQLN1Q9UMX0 589 aaKnown RBP17.66■□□□□ 0.42
SNX1-213ENST00000561026 INSL5Q9Y5Q6 135 aa17.66■□□□□ 0.42
SNX1-213ENST00000561026 A0A0B4J269 797 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 VPS37CA5D8V6 355 aaPredicted RBP17.65■□□□□ 0.42
SNX1-213ENST00000561026 OGTO15294 1046 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 OAZ2O95190 189 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 ADRB2P07550 413 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 PDCP20941 246 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 DDIT3P35638 169 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 AARSP49588 968 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNX1-213ENST00000561026 ENOX2Q16206 610 aaKnown RBP17.65■□□□□ 0.42
SNX1-213ENST00000561026 LARP4BQ92615 738 aaKnown RBP17.65■□□□□ 0.42
SNX1-213ENST00000561026 MCRS1Q96EZ8 462 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 FIZ1Q96SL8 496 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 KXD1Q9BQD3 176 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 ZHX3Q9H4I2 956 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 RPF1Q9H9Y2 349 aaKnown RBP17.65■□□□□ 0.42
SNX1-213ENST00000561026 DLGAP2Q9P1A6 1054 aa17.65■□□□□ 0.42
SNX1-213ENST00000561026 AFF4Q9UHB7 1163 aaKnown RBP17.65■□□□□ 0.42
SNX1-213ENST00000561026 TBCAO75347 108 aaKnown RBP17.64■□□□□ 0.41
SNX1-213ENST00000561026 ECI2O75521 394 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 DCNP07585 359 aaKnown RBP17.64■□□□□ 0.41
SNX1-213ENST00000561026 ABCD1P33897 745 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 GTF2BQ00403 316 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 YWHAHQ04917 246 aaPredicted RBP17.64■□□□□ 0.41
SNX1-213ENST00000561026 ADCY1Q08828 1119 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 SNW1Q13573 536 aaKnown RBP17.64■□□□□ 0.41
SNX1-213ENST00000561026 PTPAQ15257 358 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 PRSS36Q5K4E3 855 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 POTEHQ6S545 545 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 EPSTI1Q96J88 318 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 CORO1BQ9BR76 489 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 MSTO1Q9BUK6 570 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 CLIC4Q9Y696 253 aa17.64■□□□□ 0.41
SNX1-213ENST00000561026 PRR23AA6NEV1 266 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 XPOTO43592 962 aaKnown RBP17.63■□□□□ 0.41
SNX1-213ENST00000561026 MICAL2O94851 1124 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 CEBPBP17676 345 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 NMT1P30419 496 aaKnown RBP17.63■□□□□ 0.41
SNX1-213ENST00000561026 PFKPQ01813 784 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 SLC44A4Q53GD3 710 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 SPECC1Q5M775 1068 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 SLC39A4Q6P5W5 647 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 RNF19BQ6ZMZ0 732 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 USP49Q70CQ1 688 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 MAP4K3Q8IVH8 894 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 CD302Q8IX05 232 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 PJA1Q8NG27 643 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 NKD2Q969F2 451 aaPredicted RBP17.63■□□□□ 0.41
SNX1-213ENST00000561026 OXCT2Q9BYC2 517 aaPredicted RBP17.63■□□□□ 0.41
SNX1-213ENST00000561026 FOXQ1Q9C009 403 aa17.63■□□□□ 0.41
SNX1-213ENST00000561026 CPSF3Q9UKF6 684 aaKnown RBP17.63■□□□□ 0.41
SNX1-213ENST00000561026 TIMM13Q9Y5L4 95 aaPredicted RBP17.63■□□□□ 0.41
SNX1-213ENST00000561026 PDCD11Q14690 1871 aaKnown RBP17.62■□□□□ 0.41
SNX1-213ENST00000561026 FAM186AA6NE01 2351 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 ZNF197O14709 1029 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 CPB1P15086 417 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 GUCY2FP51841 1108 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 PRKCQQ04759 706 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 MLF2Q15773 248 aaPredicted RBP17.62■□□□□ 0.41
SNX1-213ENST00000561026 ZC2HC1CQ53FD0 456 aaPredicted RBP17.62■□□□□ 0.41
SNX1-213ENST00000561026 SPATA1Q5VX52 437 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 KRI1Q8N9T8 703 aaKnown RBP17.62■□□□□ 0.41
SNX1-213ENST00000561026 BEST2Q8NFU1 509 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms