RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 OSGEPQ9NPF4 335 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 GTF3C4Q9UKN8 822 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 STXBP5LQ9Y2K9 1186 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 PCDHB4Q9Y5E5 795 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 ADAMTS4O75173 837 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 KIF4AO95239 1232 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 CYP1A1P04798 512 aaPredicted RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 RARBP10826 455 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 ZSCAN20P17040 1043 aaPredicted RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 FGFR4P22455 802 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 ATICP31939 592 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 ASPAP45381 313 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 CRYBB1P53674 252 aaPredicted RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 RBM10P98175 930 aaKnown RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 ZNF200P98182 395 aaPredicted RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 CACNB2Q08289 660 aaPredicted RBP13.82□□□□□ -0.2
SNX1-211ENST00000560829 JADE1Q6IE81 842 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 NOTUMQ6P988 496 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 TMEM270Q6UE05 265 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 TRIM72Q6ZMU5 477 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 MSANTD4Q8NCY6 345 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 PPP1R13LQ8WUF5 828 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 DERAQ9Y315 318 aa13.82□□□□□ -0.2
SNX1-211ENST00000560829 BUB1BO60566 1050 aaPredicted RBP13.81□□□□□ -0.2
SNX1-211ENST00000560829 STAU1O95793 577 aaKnown RBP13.81□□□□□ -0.2
SNX1-211ENST00000560829 CYP1A2P05177 515 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 GNA15P30679 374 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 CENPCQ03188 943 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 SNX17Q15036 470 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 RPS6KA1Q15418 735 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 NT5DC3Q86UY8 548 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 CAPZA3Q96KX2 299 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 CCDC94Q9BW85 323 aaPredicted RBP13.81□□□□□ -0.2
SNX1-211ENST00000560829 GTF2IRD1Q9UHL9 959 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 COG5Q9UP83 839 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 GINS2Q9Y248 185 aa13.81□□□□□ -0.2
SNX1-211ENST00000560829 YWHAEP62258 255 aaKnown RBP13.8□□□□□ -0.2
SNX1-211ENST00000560829 TRIM32Q13049 653 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 TMEM132DQ14C87 1099 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 C11orf63Q6NUN7 778 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 PPP1R2P3Q6NXS1 205 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 FBXO38Q6PIJ6 1188 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 DAAM2Q86T65 1068 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 NOA1Q8NC60 698 aaKnown RBP13.8□□□□□ -0.2
SNX1-211ENST00000560829 CAGE1Q8TC20 777 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 TMEM40Q8WWA1 233 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 HES6Q96HZ4 224 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 BCO2Q9BYV7 579 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 CISHQ9NSE2 258 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 RNF186Q9NXI6 227 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 ITGA11Q9UKX5 1188 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 MGAMO43451 1857 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 EVPLQ92817 2033 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 NPTXRO95502 500 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 PGK1P00558 417 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 CST5P28325 142 aaPredicted RBP13.8□□□□□ -0.2
SNX1-211ENST00000560829 CXCR5P32302 372 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 PAFAH1B1P43034 410 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 CXCL17Q6UXB2 119 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 PEX26Q7Z412 305 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 SESTD1Q86VW0 696 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 KLHDC9Q8NEP7 349 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 TRIM11Q96F44 468 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 PBKQ96KB5 322 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 GOLPH3Q9H4A6 298 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 FAM124BQ9H5Z6 455 aaPredicted RBP13.8□□□□□ -0.2
SNX1-211ENST00000560829 ANKZF1Q9H8Y5 726 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 AVENQ9NQS1 362 aaPredicted RBP13.8□□□□□ -0.2
SNX1-211ENST00000560829 CTTNBP2NLQ9P2B4 639 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 UVRAGQ9P2Y5 699 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 SRRDQ9UH36 339 aa13.8□□□□□ -0.2
SNX1-211ENST00000560829 PACSIN2Q9UNF0 486 aaPredicted RBP13.8□□□□□ -0.2
SNX1-211ENST00000560829 CALCAP01258 141 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 ITGB3P05106 788 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 RPLP2P05387 115 aaKnown RBP13.79□□□□□ -0.2
SNX1-211ENST00000560829 TUBBP07437 444 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 MYBL1P10243 752 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 NBPF20Q3BBV1 942 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 ZNF667Q5HYK9 610 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 CCSAPQ6IQ19 270 aaPredicted RBP13.79□□□□□ -0.2
SNX1-211ENST00000560829 RPAINQ86UA6 219 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 SPATA4Q8NEY3 305 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 SNX27Q96L92 541 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 PSMB7Q99436 277 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 EIF2AQ9BY44 585 aaKnown RBP13.79□□□□□ -0.2
SNX1-211ENST00000560829 XPNPEP3Q9NQH7 507 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 AMFRQ9UKV5 643 aa13.79□□□□□ -0.2
SNX1-211ENST00000560829 KRT19P08727 400 aa13.78□□□□□ -0.2
SNX1-211ENST00000560829 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
SNX1-211ENST00000560829 HOXD10P28358 340 aa13.78□□□□□ -0.2
SNX1-211ENST00000560829 APLP1P51693 650 aa13.78□□□□□ -0.2
SNX1-211ENST00000560829 NOMO3P69849 1222 aa13.78□□□□□ -0.2
SNX1-211ENST00000560829 RBP5P82980 135 aa13.78□□□□□ -0.2
SNX1-211ENST00000560829 CCDC181Q5TID7 509 aa13.78□□□□□ -0.2
SNX1-211ENST00000560829 MCOLN2Q8IZK6 566 aa13.78□□□□□ -0.2
SNX1-211ENST00000560829 MMGT1Q8N4V1 131 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms