RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TESMINQ9Y4I5 508 aa5.17□□□□□ -1.58
TMOD3-207ENST00000560549 SIPA1L3O60292 1781 aaPredicted RBP5.17□□□□□ -1.58
TMOD3-207ENST00000560549 A1BGP04217 495 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 HSP90AB1P08238 724 aaKnown RBP5.16□□□□□ -1.58
TMOD3-207ENST00000560549 IL2RBP14784 551 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 CHMLP26374 656 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 APEX1P27695 318 aaKnown RBP5.16□□□□□ -1.58
TMOD3-207ENST00000560549 SELENOPP49908 381 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 RAC3P60763 192 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 SETQ01105 290 aaPredicted RBP5.16□□□□□ -1.58
TMOD3-207ENST00000560549 TERF2Q15554 542 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 ZMAT1Q5H9K5 638 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 SPRED1Q7Z699 444 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 CMIPQ8IY22 773 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 OR14K1Q8NGZ2 314 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 SLC5A5Q92911 643 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 MTMR8Q96EF0 704 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 CDK5RAP1Q96SZ6 601 aaKnown RBP5.16□□□□□ -1.58
TMOD3-207ENST00000560549 PUS7LQ9H0K6 701 aaKnown RBP5.16□□□□□ -1.58
TMOD3-207ENST00000560549 SEMA4AQ9H3S1 761 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 BICC1Q9H694 974 aaKnown RBP5.16□□□□□ -1.58
TMOD3-207ENST00000560549 C9orf78Q9NZ63 289 aaPredicted RBP5.16□□□□□ -1.58
TMOD3-207ENST00000560549 THSD7AQ9UPZ6 1657 aa5.16□□□□□ -1.58
TMOD3-207ENST00000560549 C5P01031 1676 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 UBA6A0AVT1 1052 aaPredicted RBP5.15□□□□□ -1.58
TMOD3-207ENST00000560549 SHTN1A0MZ66 631 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 ERVV-2B6SEH9 535 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 H7C1D1 291 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 GRM8O00222 908 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 MYL1P05976 194 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 CR2P20023 1033 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 RFX5P48382 616 aaPredicted RBP5.15□□□□□ -1.58
TMOD3-207ENST00000560549 PRELPP51888 382 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 PHC1P78364 1004 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 ADAM15Q13444 863 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 GCKRQ14397 625 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 SYCP2LQ5T4T6 812 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 BROXQ5VW32 411 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 Q6ZSN1 163 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 USP30Q70CQ3 517 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 GPR135Q8IZ08 494 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 TTC5Q8N0Z6 440 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 Q8N1X5 172 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 OR5AN1Q8NGI8 311 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 KLHDC4Q8TBB5 520 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 MAML3Q96JK9 1138 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 MPHOSPH6Q99547 160 aaKnown RBP5.15□□□□□ -1.58
TMOD3-207ENST00000560549 PLA2G12BQ9BX93 195 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 PCIF1Q9H4Z3 704 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 AGO3Q9H9G7 860 aaKnown RBP5.15□□□□□ -1.58
TMOD3-207ENST00000560549 WNK3Q9BYP7 1800 aa5.15□□□□□ -1.58
TMOD3-207ENST00000560549 TNKSO95271 1327 aa5.15□□□□□ -1.59
TMOD3-207ENST00000560549 PCDH11XQ9BZA7 1347 aa5.15□□□□□ -1.59
TMOD3-207ENST00000560549 PCDH11YQ9BZA8 1340 aa5.15□□□□□ -1.59
TMOD3-207ENST00000560549 PLEKHG2Q9H7P9 1386 aa5.15□□□□□ -1.59
TMOD3-207ENST00000560549 ERC2O15083 957 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 AKAP8O43823 692 aaKnown RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 CDC14BO60729 498 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 WDHD1O75717 1129 aaPredicted RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 DDX58O95786 925 aaKnown RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 SCGB1D2O95969 90 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 FGAP02671 866 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 IARSP41252 1262 aaKnown RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 ADAM8P78325 824 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 ITKQ08881 620 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 FOXD4Q12950 439 aaPredicted RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 SART3Q15020 963 aaKnown RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 PDCD1Q15116 288 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 DDB1Q16531 1140 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 ABCB5Q2M3G0 1257 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 SPDYAQ5MJ70 313 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 SYDE2Q5VT97 1194 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 CRIP3Q6Q6R5 217 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 UNQ6494/PRO21346Q6UXR6 183 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 KRT27Q7Z3Y8 459 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 PKD1L3Q7Z443 1732 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 HSCBQ8IWL3 235 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 TMTC2Q8N394 836 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 GIMAP8Q8ND71 665 aaPredicted RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 CALML6Q8TD86 181 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 SH3RF3Q8TEJ3 882 aaPredicted RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 PIGBQ92521 554 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 RILPL2Q969X0 211 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 KIF1BPQ96EK5 621 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 SMAD5Q99717 465 aaKnown RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 OR10A2Q9H208 303 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 ACSS2Q9NR19 701 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 TOPORSQ9NS56 1045 aaPredicted RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 PARP4Q9UKK3 1724 aaKnown RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 ASAP1Q9ULH1 1129 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 AOX1Q06278 1338 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 USP42Q9H9J4 1324 aaKnown RBP5.14□□□□□ -1.59
TMOD3-207ENST00000560549 KCPQ6ZWJ8 1503 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 TNS2Q63HR2 1409 aa5.14□□□□□ -1.59
TMOD3-207ENST00000560549 N4BP2Q86UW6 1770 aaPredicted RBP5.13□□□□□ -1.59
TMOD3-207ENST00000560549 SCN11AQ9UI33 1791 aa5.13□□□□□ -1.59
TMOD3-207ENST00000560549 RAB27AP51159 221 aa5.13□□□□□ -1.59
TMOD3-207ENST00000560549 OCRLQ01968 901 aa5.13□□□□□ -1.59
TMOD3-207ENST00000560549 EPHA7Q15375 998 aa5.13□□□□□ -1.59
TMOD3-207ENST00000560549 ZNF568Q3ZCX4 644 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms