RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 NFIXQ14938 502 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 FSCN1Q16658 493 aaKnown RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 PROSER3Q2NL68 480 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 DNAJC21Q5F1R6 531 aaKnown RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 CCDC158Q5M9N0 1113 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 RTP2Q5QGT7 225 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 SFRP5Q5T4F7 317 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 INTS11Q5TA45 600 aaKnown RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 SWSAP1Q6NVH7 229 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 ESRP1Q6NXG1 681 aaKnown RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 FAM180BQ6P0A1 224 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 SYDE1Q6ZW31 735 aaPredicted RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 USP45Q70EL2 814 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 NBPF5PQ86XG9 351 aaPredicted RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 NOSTRINQ8IVI9 506 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 SLC41A1Q8IVJ1 513 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 TRMT2AQ8IZ69 625 aaKnown RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 KIAA0319LQ8IZA0 1049 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 ZNF713Q8N859 430 aaPredicted RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 CCT6BQ92526 530 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 FAM167BQ9BTA0 163 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 B3GNT5Q9BYG0 378 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 WDR12Q9GZL7 423 aaKnown RBP6.91□□□□□ -1.3
USP8-210ENST00000560379 KCNK12Q9HB15 430 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 ATP13A1Q9HD20 1204 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 ARHGAP28Q9P2N2 729 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 TUBD1Q9UJT1 453 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 TMX2Q9Y320 296 aa6.91□□□□□ -1.3
USP8-210ENST00000560379 TCRBV5S4A2TA0A5A2 114 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 RASA4BC9J798 803 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 RASA4O43374 803 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 B3GALT2O43825 422 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 TLR5O60602 858 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 GNAT1P11488 350 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 HSD3B1P14060 373 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 MYL6BP14649 208 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 TM4SF1P30408 202 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 AFMP43652 599 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 RPL11P62913 178 aaKnown RBP6.9□□□□□ -1.3
USP8-210ENST00000560379 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
USP8-210ENST00000560379 BTKQ06187 659 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 EXOSC9Q06265 439 aaKnown RBP6.9□□□□□ -1.3
USP8-210ENST00000560379 LAPTM5Q13571 262 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 PDCD2Q16342 344 aaPredicted RBP6.9□□□□□ -1.3
USP8-210ENST00000560379 PARP10Q53GL7 1025 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 SMIM5Q71RC9 77 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 TBC1D1Q86TI0 1168 aaPredicted RBP6.9□□□□□ -1.3
USP8-210ENST00000560379 ZZZ3Q8IYH5 903 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 PRR18Q8N4B5 295 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 TSPYL6Q8N831 410 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 CNBD1Q8NA66 436 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 SPATA5Q8NB90 893 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 NUP133Q8WUM0 1156 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 HVCN1Q96D96 273 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 TBC1D31Q96DN5 1066 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 KIRREL1Q96J84 757 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 RIPOR3Q96MK2 946 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 PTCHD1Q96NR3 888 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 SPAG5Q96R06 1193 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 NYXQ9GZU5 481 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 TSPY26PQ9H489 355 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 PRDM5Q9NQX1 630 aaPredicted RBP6.9□□□□□ -1.3
USP8-210ENST00000560379 ACSS2Q9NR19 701 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 LMCD1Q9NZU5 365 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 MSRAQ9UJ68 235 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 L1RE1Q9UN81 338 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 EDARQ9UNE0 448 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 LRCH1Q9Y2L9 728 aa6.9□□□□□ -1.3
USP8-210ENST00000560379 LRRFIP2Q9Y608 721 aaKnown RBP6.9□□□□□ -1.3
USP8-210ENST00000560379 CHD4Q14839 1912 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 SCDO00767 359 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 FGF10O15520 208 aaPredicted RBP6.89□□□□□ -1.31
USP8-210ENST00000560379 CYP17A1P05093 508 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 COL6A2P12110 1019 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 PEX2P28328 305 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 CHKAP35790 457 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 MAPK9P45984 424 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 PIP4K2AP48426 406 aaPredicted RBP6.89□□□□□ -1.31
USP8-210ENST00000560379 ZNF132P52740 706 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 SNX16P57768 344 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 TGFB2P61812 414 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 TNK2Q07912 1038 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 CT83Q5H943 113 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 RNF220Q5VTB9 566 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 AGAP9Q5VTM2 703 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 TBC1D9BQ66K14 1250 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 CPZQ66K79 652 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 NPNTQ6UXI9 565 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 COPS6Q7L5N1 327 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 GALNT5Q7Z7M9 940 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 SIRT2Q8IXJ6 389 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 PPM1NQ8N819 430 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 COA7Q96BR5 231 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 EAF2Q96CJ1 260 aaPredicted RBP6.89□□□□□ -1.31
USP8-210ENST00000560379 GCC1Q96CN9 775 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 ZBTB10Q96DT7 871 aa6.89□□□□□ -1.31
USP8-210ENST00000560379 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms